RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 UBXN2AP68543 259 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 MAP2K5Q13163 448 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 GRB14Q14449 540 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 STOX1Q6ZVD7 989 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CYB5R4Q7L1T6 521 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RIOX2Q8IUF8 465 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RIPK3Q9Y572 518 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 E7EWF7 191 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CDC45O75419 566 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ADORA2AP29274 412 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RGS2P41220 211 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CCDC96Q2M329 555 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TTBK2Q6IQ55 1244 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 DGKHQ86XP1 1220 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 MROH8Q9H579 483 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SLC38A10Q9HBR0 1119 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RAVER2Q9HCJ3 691 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TNKSO95271 1327 aa16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 FRMPD2Q68DX3 1309 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ZBED4O75132 1171 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SLC25A27O95847 323 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 HMGCRP04035 888 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PDHBP11177 359 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SLC16A2P36021 539 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SNAP25P60880 206 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 NPLOC4Q8TAT6 608 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 DCAF4Q8WV16 495 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 APBA2Q99767 749 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TEX13BQ9BXU2 312 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TNRC18O15417 2968 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 STRNO43815 780 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 NT5C2P49902 561 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TRDNQ13061 729 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 DPP9Q86TI2 863 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PRR12Q9ULL5 1215 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ATP2A1O14983 1001 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PLA2G6O60733 806 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 COBLO75128 1261 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 FCER1AP12319 257 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 MLLT1Q03111 559 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CCDC178Q5BJE1 867 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PNMA1Q8ND90 353 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ANKS1AQ92625 1134 aa16.55■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PGK2P07205 417 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 HOXC6P09630 235 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ZNF536O15090 1300 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SLC27A2O14975 620 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 GJB1P08034 283 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CACNB2Q08289 660 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SEC23AQ15436 765 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CREB3L3Q68CJ9 461 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SHISA4Q96DD7 197 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 MMP19Q99542 508 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CPVLQ9H3G5 476 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TAL1P17542 331 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CYP2C19P33261 490 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 OAZ1P54368 228 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 KCTD2Q14681 263 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 MAP3K21Q5TCX8 1036 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 TRMT44Q8IYL2 757 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 SENP2Q9HC62 589 aa16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 PAK6Q9NQU5 681 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB1-202ENST00000399079 RPTORQ8N122 1335 aa16.52■□□□□ 0.23
HLA-DQB1-202ENST00000399079 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB1-202ENST00000399079 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-202ENST00000399079 FDX1P10109 184 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms