RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ABHD10Q9NUJ1 306 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 CDC23Q9UJX2 597 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 TTF2Q9UNY4 1162 aaKnown RBP28.88■■■□□ 2.21
COL13A1-203ENST00000398969 ADRA2BP18089 450 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 ERVK-24P63145 666 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 JAKMIP3Q5VZ66 844 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 ARL6IP4Q66PJ3 421 aaKnown RBP28.87■■■□□ 2.21
COL13A1-203ENST00000398969 RMND1Q9NWS8 449 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 ARPP21Q9UBL0 812 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-203ENST00000398969 BRWD3Q6RI45 1802 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 RPS8P62241 208 aaKnown RBP28.87■■■□□ 2.21
COL13A1-203ENST00000398969 PDS5AQ29RF7 1337 aaKnown RBP28.87■■■□□ 2.21
COL13A1-203ENST00000398969 TCP11X2Q5H9J9 407 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 RCSD1Q6JBY9 416 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 C4orf32Q8N8J7 132 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 ACRBPQ8NEB7 543 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 TAB2Q9NYJ8 693 aa28.87■■■□□ 2.21
COL13A1-203ENST00000398969 BAZ2BQ9UIF8 2168 aaKnown RBP28.87■■■□□ 2.21
COL13A1-203ENST00000398969 KIAA1551Q9HCM1 1747 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 RPN1P04843 607 aaKnown RBP28.86■■■□□ 2.21
COL13A1-203ENST00000398969 CYP2C19P33261 490 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 ZSWIM4Q9H7M6 989 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 TSPY2A6NKD2 308 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 KCNJ18B7U540 433 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 RNF225M0QZC1 329 aaPredicted RBP28.86■■■□□ 2.21
COL13A1-203ENST00000398969 LONP1P36776 959 aaKnown RBP28.86■■■□□ 2.21
COL13A1-203ENST00000398969 KCNJ12Q14500 433 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 SBK1Q52WX2 424 aa28.86■■■□□ 2.21
COL13A1-203ENST00000398969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.85■■■□□ 2.21
COL13A1-203ENST00000398969 CALML3P27482 149 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 CDC25AP30304 524 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 KIF5BP33176 963 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 NFIXQ14938 502 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 CEP112Q8N8E3 955 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 ANKRD20A12PQ8NF67 263 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 FUT8Q9BYC5 575 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 TRIM37O94972 964 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 TRIM14Q14142 442 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 SLC27A3Q5K4L6 730 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 BLIDQ8IZY5 108 aa28.85■■■□□ 2.21
COL13A1-203ENST00000398969 MYH8P13535 1937 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 FAM205AQ6ZU69 1335 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 CCDC66A2RUB6 948 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 CCDC151A5D8V7 595 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 ERICH4A6NGS2 130 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 POLR3GO15318 223 aaPredicted RBP28.84■■■□□ 2.21
COL13A1-203ENST00000398969 PRDX5P30044 214 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 TUBB2AQ13885 445 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 NUP88Q99567 741 aaPredicted RBP28.84■■■□□ 2.21
COL13A1-203ENST00000398969 TUBB2BQ9BVA1 445 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 PUF60Q9UHX1 559 aaKnown RBP28.84■■■□□ 2.21
COL13A1-203ENST00000398969 GDAQ9Y2T3 454 aa28.84■■■□□ 2.21
COL13A1-203ENST00000398969 CTAGE9A4FU28 777 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 CYP26C1Q6V0L0 522 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 SLC35F6Q8N357 371 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 TM4SF1P30408 202 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 PRCPP42785 496 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 BRD3Q15059 726 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 KIF4BQ2VIQ3 1234 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 TFCP2L1Q9NZI6 479 aa28.83■■■□□ 2.21
COL13A1-203ENST00000398969 OAS2P29728 719 aaKnown RBP28.82■■■□□ 2.2
COL13A1-203ENST00000398969 HIBADHP31937 336 aaKnown RBP28.82■■■□□ 2.2
COL13A1-203ENST00000398969 STAT6P42226 847 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 SMC1AQ14683 1233 aaKnown RBP28.82■■■□□ 2.2
COL13A1-203ENST00000398969 ANKZF1Q9H8Y5 726 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 SH3GLB2Q9NR46 395 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.82■■■□□ 2.2
COL13A1-203ENST00000398969 MAPK8IP1Q9UQF2 711 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 UBR3Q6ZT12 1888 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 ABL1P00519 1130 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 GPKOWQ92917 476 aaPredicted RBP eCLIP28.82■■■□□ 2.2
COL13A1-203ENST00000398969 KAT14Q9H8E8 782 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 PCDHA4Q9UN74 947 aa28.82■■■□□ 2.2
COL13A1-203ENST00000398969 ARHGAP25P42331 645 aa28.81■■■□□ 2.2
COL13A1-203ENST00000398969 LONRF2Q1L5Z9 754 aa28.81■■■□□ 2.2
COL13A1-203ENST00000398969 MAST2Q6P0Q8 1798 aa28.81■■■□□ 2.2
COL13A1-203ENST00000398969 DISC1Q9NRI5 854 aa28.81■■■□□ 2.2
COL13A1-203ENST00000398969 KRT9P35527 623 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 WWC2Q6AWC2 1192 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 H7C1D1 291 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 IRF2BP1Q8IU81 584 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 RASGRP4Q8TDF6 673 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 MCM9Q9NXL9 1143 aa28.8■■■□□ 2.2
COL13A1-203ENST00000398969 UBXN1Q04323 297 aa28.79■■■□□ 2.2
COL13A1-203ENST00000398969 NAALADL2Q58DX5 795 aa28.79■■■□□ 2.2
COL13A1-203ENST00000398969 ADSSL1Q8N142 457 aa28.79■■■□□ 2.2
COL13A1-203ENST00000398969 NAPGQ99747 312 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-203ENST00000398969 IL17RBQ9NRM6 502 aa28.79■■■□□ 2.2
COL13A1-203ENST00000398969 MYO1AQ9UBC5 1043 aa28.79■■■□□ 2.2
COL13A1-203ENST00000398969 USP17L8P0C7I0 530 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 SLC4A8Q2Y0W8 1093 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 STAG2Q8N3U4 1231 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 CNBD1Q8NA66 436 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 MSANTD4Q8NCY6 345 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 TNRC6CQ9HCJ0 1690 aaKnown RBP28.78■■■□□ 2.2
COL13A1-203ENST00000398969 POTEB2H3BUK9 544 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 M0R2N6 131 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 PARP1P09874 1014 aaKnown RBP28.78■■■□□ 2.2
COL13A1-203ENST00000398969 TFAP4Q01664 338 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 TYW1BQ6NUM6 668 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms