RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 IRAK4Q9NWZ3 460 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 PDE2AO00408 941 aaPredicted RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 PRC1O43663 620 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 AP1G2O75843 785 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 SLC7A5Q01650 507 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 ITFG2Q969R8 447 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 DMGDHQ9UI17 866 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CDKL5O76039 1030 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 TRIM37O94972 964 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 SLC39A6Q13433 755 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CCDC47Q96A33 483 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 ATRNO75882 1429 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 KCNB1Q14721 858 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 THOC1Q96FV9 657 aaKnown RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 HOMER3Q9NSC5 361 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 PHKG2P15735 406 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 C6orf89Q6UWU4 347 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 OR8K1Q8NGG5 319 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 PARD3BQ8TEW8 1205 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 NSMCE1Q8WV22 266 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 HSPD1P10809 573 aaKnown RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 SPAG1Q07617 926 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 ANKRD20A8PQ5CZ79 823 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 KSR2Q6VAB6 950 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 AIFM3Q96NN9 605 aa16.74■□□□□ 0.27
CYLD-202ENST00000398568 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
CYLD-202ENST00000398568 HOXB7P09629 217 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 HAUS7Q99871 368 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 REXO2Q9Y3B8 237 aaKnown RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 SRRM3A6NNA2 597 aaPredicted RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 HPDP32754 393 aaPredicted RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 MRPS25P82663 173 aaKnown RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 CDKAL1Q5VV42 579 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 STK11IPQ8N1F8 1099 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 CAVIN3Q969G5 261 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 NOD2Q9HC29 1040 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 STIM2Q9P246 746 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 SCTRP47872 440 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 FAM210AQ96ND0 272 aa16.73■□□□□ 0.27
CYLD-202ENST00000398568 LUC7L2Q9Y383 392 aaKnown RBP16.73■□□□□ 0.27
CYLD-202ENST00000398568 KDRP35968 1356 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 GMNCA6NCL1 334 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 PAFAH1B1P43034 410 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 ACCSLQ4AC99 568 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 TAB2Q9NYJ8 693 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
CYLD-202ENST00000398568 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 DNM1LO00429 736 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 AFMP43652 599 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 SLMAPQ14BN4 828 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 KRT31Q15323 416 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 AMOTQ4VCS5 1084 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 CUL5Q93034 780 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
CYLD-202ENST00000398568 TRPC6Q9Y210 931 aa16.72■□□□□ 0.27
CYLD-202ENST00000398568 HAND2P61296 217 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 PPP1R7Q15435 360 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 IMMTQ16891 758 aaKnown RBP16.71■□□□□ 0.27
CYLD-202ENST00000398568 HIBCHQ6NVY1 386 aaPredicted RBP16.71■□□□□ 0.27
CYLD-202ENST00000398568 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 ATP6V1G3Q96LB4 118 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 TFR2Q9UP52 801 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 GLI3P10071 1580 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 ATP6V1G2O95670 118 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
CYLD-202ENST00000398568 UBXN1Q04323 297 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 XRCC4Q13426 336 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms