RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RPL10P27635 214 aaKnown RBP4.58□□□□□ -1.68
CD47-203ENST00000398258 ITGAEP38570 1179 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 UBXN11Q5T124 520 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 NT5DC1Q5TFE4 455 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 DUSP9Q99956 384 aaKnown RBP4.58□□□□□ -1.68
CD47-203ENST00000398258 FOXP3Q9BZS1 431 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 RNF19AQ9NV58 838 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 PARP2Q9UGN5 583 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 SRRDQ9UH36 339 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 IRS2Q9Y4H2 1338 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 C1QTNF3-AMACRE9PGA6 284 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 GIPC1O14908 333 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 ITGB3P05106 788 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 GNA15P30679 374 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 KIR2DL1P43626 348 aaPredicted RBP4.57□□□□□ -1.68
CD47-203ENST00000398258 KIR2DL2P43627 348 aaPredicted RBP4.57□□□□□ -1.68
CD47-203ENST00000398258 DLX2Q07687 328 aaPredicted RBP4.57□□□□□ -1.68
CD47-203ENST00000398258 WAPLQ7Z5K2 1190 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 HDAC8Q9BY41 377 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 PRDM14Q9GZV8 571 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 BCL11AQ9H165 835 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 SMPD4Q9NXE4 827 aa4.57□□□□□ -1.68
CD47-203ENST00000398258 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 TCF3P15923 654 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 HMGA2P52926 109 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 BBS9Q3SYG4 887 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 LIPIQ6XZB0 460 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 DDX1Q92499 740 aaKnown RBP4.56□□□□□ -1.68
CD47-203ENST00000398258 SYTL4Q96C24 671 aaPredicted RBP4.56□□□□□ -1.68
CD47-203ENST00000398258 KREMEN1Q96MU8 473 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 BACH2Q9BYV9 841 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 SRCIN1Q9C0H9 1055 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 ZMYM5Q9UJ78 669 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 PALD1Q9ULE6 856 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 SPG7Q9UQ90 795 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 AK5Q9Y6K8 562 aa4.56□□□□□ -1.68
CD47-203ENST00000398258 NUDT19A8MXV4 375 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 ZNF20P17024 532 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 CNR2P34972 360 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 CAP1Q01518 475 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 XPCQ01831 940 aaPredicted RBP4.55□□□□□ -1.68
CD47-203ENST00000398258 SLC14A2Q15849 920 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 HSF5Q4G112 596 aaPredicted RBP4.55□□□□□ -1.68
CD47-203ENST00000398258 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 SV2BQ7L1I2 683 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 ZFPM1Q8IX07 1006 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 FNIP1Q8TF40 1166 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 ZNF526Q8TF50 670 aaPredicted RBP4.55□□□□□ -1.68
CD47-203ENST00000398258 FAM161BQ96MY7 647 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 MRIQ9BWK5 157 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 TNFRSF12AQ9NP84 129 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 ADAM30Q9UKF2 790 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
CD47-203ENST00000398258 FADS2P1A8MWK0 482 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 SCAMP3O14828 347 aaKnown RBP4.54□□□□□ -1.68
CD47-203ENST00000398258 SORBS3O60504 671 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 DNAJA2O60884 412 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 FKTNO75072 461 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 C6P13671 934 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 RTP1P59025 263 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 PSMD2Q13200 908 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 RAB3GAP1Q15042 981 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 CRB2Q5IJ48 1285 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 RNF111Q6ZNA4 994 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 FAM13CQ8NE31 585 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 TCTN2Q96GX1 697 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 C1QTNF3Q9BXJ4 246 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 C12orf49Q9H741 205 aa4.54□□□□□ -1.68
CD47-203ENST00000398258 METTL5Q9NRN9 209 aaKnown RBP4.54□□□□□ -1.68
CD47-203ENST00000398258 ABLIM1O14639 778 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 NOBOXO60393 691 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 MPOP05164 745 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 CTSHP09668 335 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 HTRA3P83110 453 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 ZNF200P98182 395 aaPredicted RBP4.53□□□□□ -1.68
CD47-203ENST00000398258 CBX2Q14781 532 aaPredicted RBP4.53□□□□□ -1.68
CD47-203ENST00000398258 PLEKHN1Q494U1 663 aaPredicted RBP4.53□□□□□ -1.68
CD47-203ENST00000398258 CPZQ66K79 652 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 TMC3Q7Z5M5 1100 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 C8orf49Q96NF6 230 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 SUSD2Q9UGT4 822 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 TCFL5Q9UL49 500 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 MINPP1Q9UNW1 487 aa4.53□□□□□ -1.68
CD47-203ENST00000398258 GPR55Q9Y2T6 319 aaPredicted RBP4.53□□□□□ -1.68
CD47-203ENST00000398258 CHURC1-FNTBB4DL54 471 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 MSL3P1P0C860 447 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 ATF2P15336 505 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 TFE3P19532 575 aaPredicted RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 EIF4BP23588 611 aaKnown RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 ACVRL1P37023 503 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 RPS26P62854 115 aaKnown RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 NMIQ13287 307 aaPredicted RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 SNW1Q13573 536 aaKnown RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 AGMOQ6ZNB7 445 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 SPRED1Q7Z699 444 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 METTL16Q86W50 562 aaKnown RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 LNPKQ9C0E8 428 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 MRS2Q9HD23 443 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 USP40Q9NVE5 1235 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms