RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 EFCC1Q9HA90 598 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 SLAIN2Q9P270 581 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
RGPD2-201ENST00000398146 LMNB1P20700 586 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 VPS41P49754 854 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 EIF4A2Q14240 407 aaKnown RBP12.37□□□□□ -0.43
RGPD2-201ENST00000398146 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 BTDP43251 543 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
RGPD2-201ENST00000398146 FBXO11Q86XK2 927 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 DPF3Q92784 378 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 DNAJC7Q99615 494 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
RGPD2-201ENST00000398146 GPBP1Q86WP2 473 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 CNGA4Q8IV77 575 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
RGPD2-201ENST00000398146 C1orf112Q9NSG2 853 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 H7C0C1 242 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 SDSP20132 328 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 ATP5OP48047 213 aa12.37□□□□□ -0.43
RGPD2-201ENST00000398146 CEP104O60308 925 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 MMEL1Q495T6 779 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 BLZF1Q9H2G9 400 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 COG4Q9H9E3 785 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 PCDHA1Q9Y5I3 950 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 DEXIO95424 95 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 KCNA6P17658 529 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 UPP2O95045 317 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 KCNJ6P48051 423 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 ADCY1Q08828 1119 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.36□□□□□ -0.43
RGPD2-201ENST00000398146 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
RGPD2-201ENST00000398146 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
RGPD2-201ENST00000398146 SEPT8Q92599 483 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 SPDL1Q96EA4 605 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 A0A1B0GVL5 298 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 GYG1P46976 350 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 RFX6Q8HWS3 928 aa12.36□□□□□ -0.43
RGPD2-201ENST00000398146 NPR1P16066 1061 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 NLGN1Q8N2Q7 840 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 HAUS1Q96CS2 278 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 VPS18Q9P253 973 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 SEC24BO95487 1268 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 RWDD4Q6NW29 188 aaKnown RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 U2AF1L4Q8WU68 220 aaKnown RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 STAMQ92783 540 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 EXT2Q93063 718 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 VCXQ9H320 206 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 MAP3K5Q99683 1374 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 TRAIPQ9BWF2 469 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
RGPD2-201ENST00000398146 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
RGPD2-201ENST00000398146 NSUN2Q08J23 767 aaKnown RBP eCLIP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 AFG1LQ8WV93 481 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 PPP2R3CQ969Q6 453 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 GNGT2O14610 69 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 BUB1BO60566 1050 aaPredicted RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 CCND2P30279 289 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 TECP42680 631 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 ANKRD42Q8N9B4 389 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 PHKBQ93100 1093 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 GSTA4O15217 222 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 ATP11AP98196 1134 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 REXO1Q8N1G1 1221 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 SH3KBP1Q96B97 665 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 DYRK4Q9NR20 520 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms