RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 ROBO3Q96MS0 1386 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 GPR75-ASB3A0A0A6YYF3 556 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 EIF1AYO14602 144 aaKnown RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 DDNO94850 711 aaPredicted RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 NBPF7P0C2Y1 421 aaPredicted RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 PIP4K2AP48426 406 aaPredicted RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 TBX4P57082 545 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 FGD1P98174 961 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 DEFB115Q30KQ5 88 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 CEP85Q6P2H3 762 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 SLC4A10Q6U841 1118 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 APBB1IPQ7Z5R6 666 aaPredicted RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 DNAJC5GQ8N7S2 189 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 BRINP2Q9C0B6 783 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 ZNF287Q9HBT7 754 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 NMRK2Q9NPI5 230 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 SEC31BQ9NQW1 1179 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 SWAP70Q9UH65 585 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 MYPNQ86TC9 1320 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 CXCL11O14625 94 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 AGERQ15109 404 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 LINC01559Q495D7 138 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 CCDC178Q5BJE1 867 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 RGMBQ6NW40 437 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 CLASRPQ8N2M8 674 aaKnown RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 MORC4Q8TE76 937 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 DCBLD2Q96PD2 775 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 IER2Q9BTL4 223 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 AS3MTQ9HBK9 375 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 LRRFIP2Q9Y608 721 aaKnown RBP4.53□□□□□ -1.68
UBE3A-202ENST00000397954 PLIN4Q96Q06 1357 aa4.53□□□□□ -1.68
UBE3A-202ENST00000397954 ELL2O00472 640 aaPredicted RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 RIMBP2O15034 1052 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SRGAP3O43295 1099 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 DXOO77932 396 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 ATP5JP18859 108 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 GTF2A2P52657 109 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 PPATQ06203 517 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 PPIL2Q13356 520 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 RASA3Q14644 834 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 TNNI3KQ59H18 835 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SH3PXD2AQ5TCZ1 1133 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 TMEM57Q8N5G2 664 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SH3TC2Q8TF17 1288 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 HNRNPLLQ8WVV9 542 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 EDEM1Q92611 657 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 ZFRQ96KR1 1074 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SPOCK3Q9BQ16 436 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 TTF2Q9UNY4 1162 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SALL2Q9Y467 1007 aaPredicted RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 USP3Q9Y6I4 520 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 FPGT-TNNI3KV9GXZ4 949 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 RAD50Q92878 1312 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 WDR33Q9C0J8 1336 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SSBP05455 408 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 HOXC6P09630 235 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 CRKP46108 304 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 RRP1P56182 461 aaKnown RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 MAP3K12Q12852 859 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SCARF1Q14162 830 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 MFSD14BQ5SR56 506 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 FOXP4Q8IVH2 680 aaPredicted RBP4.52□□□□□ -1.69
UBE3A-202ENST00000397954 AMOTL1Q8IY63 956 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SLC10A4Q96EP9 437 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 CDCA5Q96FF9 252 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 CSRNP1Q96S65 589 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 MTA3Q9BTC8 594 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 OSBPL3Q9H4L5 887 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 DCTPP1Q9H773 170 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 SH2D4AQ9H788 454 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 ZSWIM6Q9HCJ5 1215 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 KBTBD4Q9NVX7 518 aa4.52□□□□□ -1.69
UBE3A-202ENST00000397954 WNT10BO00744 389 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 EIF4BP23588 611 aaKnown RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 NASPP49321 788 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 GDF10P55107 478 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CNGB1Q14028 1251 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 PLEKHG4Q58EX7 1191 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ODR4Q5SWX8 454 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ALKBH2Q6NS38 261 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SMIM5Q71RC9 77 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 FASTKD5Q7L8L6 764 aaKnown RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 KRT26Q7Z3Y9 468 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SAPCD2Q86UD0 394 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CCDC24Q8N4L8 307 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 EPS8L3Q8TE67 593 aaKnown RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 C2orf49Q9BVC5 232 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 FAM126AQ9BYI3 521 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 WBP1LQ9NX94 342 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 GJA3Q9Y6H8 435 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 A0A1B0GUL7 405 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 FAM177BA6PVY3 158 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CTNND1O60716 968 aaKnown RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 PDGFRBP09619 1106 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 EPHA10Q5JZY3 1008 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms