RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PCDHA6Q9UN73 950 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 MAPK8IP1Q9UQF2 711 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PCDHA8Q9Y5H6 950 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ERCC6LQ2NKX8 1250 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 KMT5BQ4FZB7 885 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TRERF1Q96PN7 1200 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 SH3GLB2Q9NR46 395 aa20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ADD3Q9UEY8 706 aaKnown RBP20.75■□□□□ 0.91
CHRFAM7A-202ENST00000397827 M0R2N6 131 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 LDHCP07864 332 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 MTF1Q14872 753 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CT47A1Q5JQC4 288 aaPredicted RBP20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 FCHSD1Q86WN1 690 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TMEM60Q9H2L4 133 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ARL6IP4Q66PJ3 421 aaKnown RBP20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 IGSF22Q8N9C0 903 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PHLPP2Q6ZVD8 1323 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CCT6AP40227 531 aaKnown RBP20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GNAQP50148 359 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 RBL2Q08999 1139 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CREBRFQ8IUR6 639 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PLIN2Q99541 437 aa20.74■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GTPBP6O43824 516 aaPredicted RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 URI1O94763 535 aaPredicted RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TUBB4AP04350 444 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 LONP1P36776 959 aaKnown RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CDK8P49336 464 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 FBXO38Q6PIJ6 1188 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TCP11L1Q9NUJ3 509 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 NAV1Q8NEY1 1877 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PALM3A6NDB9 673 aaPredicted RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 AKR1B15C9JRZ8 316 aaPredicted RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 KLRF2D3W0D1 207 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 STXBP3O00186 592 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TULP2O00295 520 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 STAT6P42226 847 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 EYA3Q99504 573 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 BARHL2Q9NY43 387 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CALCOCO1Q9P1Z2 691 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GDAQ9Y2T3 454 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 LY75O60449 1722 aa20.73■□□□□ 0.91
CHRFAM7A-202ENST00000397827 SOWAHDA6NJG2 315 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 RASSF8Q8NHQ8 419 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 THSD7AQ9UPZ6 1657 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 TXLNAP40222 546 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 MFSD14BQ5SR56 506 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 DTHD1Q6ZMT9 781 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GGA1Q9UJY5 639 aa20.72■□□□□ 0.91
CHRFAM7A-202ENST00000397827 RPN1P04843 607 aaKnown RBP20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 SERPINB2P05120 415 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GYS1P13807 737 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PBX1P40424 430 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CCDC178Q5BJE1 867 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 USP17L2Q6R6M4 530 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 WDR24Q96S15 920 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 C15orf52Q6ZUT6 534 aaKnown RBP20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 PPFIBP1Q86W92 1011 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 CCDC148Q8NFR7 591 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 ZBTB9Q96C00 473 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 DISC1Q9NRI5 854 aa20.71■□□□□ 0.91
CHRFAM7A-202ENST00000397827 FLT1P17948 1338 aa20.7■□□□□ 0.91
CHRFAM7A-202ENST00000397827 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GNG11P61952 73 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 NAALADL2Q58DX5 795 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CTAGE1Q96RT6 745 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PYM1Q9BRP8 204 aaKnown RBP20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 VAT1LQ9HCJ6 419 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 POLLQ9UGP5 575 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GOLGB1Q14789 3259 aaKnown RBP20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PAK1Q13153 545 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 KRT31Q15323 416 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 FILIP1LQ4L180 1135 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 C16orf86Q6ZW13 317 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 SNED1Q8TER0 1413 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 NELFBQ8WX92 580 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 VPS16Q9H269 839 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ATP2B4P23634 1241 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CASP14P31944 242 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PRCPP42785 496 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ZNF658Q5TYW1 1059 aaPredicted RBP20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 IL1R1P14778 569 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RHBDL3P58872 404 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CEP95Q96GE4 821 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 MRPL44Q9H9J2 332 aaKnown RBP20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RWDD2AQ9UIY3 292 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
CHRFAM7A-202ENST00000397827 NAPAP54920 295 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ST5P78524 1137 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PANX2Q96RD6 677 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ZNF287Q9HBT7 754 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms