RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 KRT31Q15323 416 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 KCTD1Q719H9 257 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CAGE1Q8TC20 777 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 GSDMAQ96QA5 445 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CTAGE1Q96RT6 745 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 PLEKHG2Q9H7P9 1386 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 PRCPP42785 496 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 DBNDD1Q9H9R9 158 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 RMND1Q9NWS8 449 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 LEMD3Q9Y2U8 911 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 ORC4O43929 436 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 ATP2C1P98194 919 aaPredicted RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 UBE2SQ16763 222 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 TRIML1Q8N9V2 468 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 ATRNO75882 1429 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 ERCC5P28715 1186 aaPredicted RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 RCSD1Q6JBY9 416 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 TC2NQ8N9U0 490 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 PLCG1P19174 1290 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 PDE4CQ08493 712 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 DPYDQ12882 1025 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 REXO1Q8N1G1 1221 aaKnown RBP11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 MMRN2Q9H8L6 949 aa11.74□□□□□ -0.53
CPSF1P1-201ENST00000397477 CTIFO43310 598 aaKnown RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 GNA11P29992 359 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 COPB1P53618 953 aaKnown RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 ARID5AQ03989 594 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 TBC1D8BQ0IIM8 1120 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 FUT2Q10981 343 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 LRRC41Q15345 812 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 ADAMTS7Q9UKP4 1686 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 B4DLN1 442 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 MCM6Q14566 821 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 LUC7L2Q9Y383 392 aaKnown RBP11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 ENC1O14682 589 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 STX10O60499 249 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 RASA1P20936 1047 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 PSMB7Q99436 277 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 PCDHA6Q9UN73 950 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
CPSF1P1-201ENST00000397477 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 CYTH3O43739 400 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 MATR3P43243 847 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 VPS72Q15906 364 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 IL17AQ16552 155 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 TMEM266Q2M3C6 531 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 USH1GQ495M9 461 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 CNGA4Q8IV77 575 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 MED15Q96RN5 788 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 DISC1Q9NRI5 854 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 OR52Z1P0C646 297 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 ANKRD7Q92527 254 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 MAD2L2Q9UI95 211 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 POTEMA6NI47 508 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 FCER1AP12319 257 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 CALCRLQ16602 461 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 FAM207AQ9NSI2 230 aaPredicted RBP11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 TJP1Q07157 1748 aa11.72□□□□□ -0.53
CPSF1P1-201ENST00000397477 AKR1B1P15121 316 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 LONP1P36776 959 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms