RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PKN2Q16513 984 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 FBXO46Q6PJ61 603 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 SRBD1Q8N5C6 995 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 PHKBQ93100 1093 aa19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 CNTNAP5Q8WYK1 1306 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 F5H6K3 240 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 NDUFB10O96000 172 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 KLRC3Q07444 240 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 ZNF543Q08ER8 600 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 ASPRV1Q53RT3 343 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 SLFN13Q68D06 897 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 DCAF4Q8WV16 495 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 SH2D4AQ9H788 454 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 PICK1Q9NRD5 415 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 ORC3Q9UBD5 711 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-205ENST00000397406 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 CETPP11597 493 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 SSRP1Q08945 709 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 SNAPC2Q13487 334 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 TAF1CQ15572 869 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 SLC35G1Q2M3R5 365 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 CCDC82Q8N4S0 544 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 GMCL1Q96IK5 515 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 WDR18Q9BV38 432 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 SLC26A6Q9BXS9 759 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 VCPKMTQ9H867 229 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 TRIM17Q9Y577 477 aa19.65■□□□□ 0.74
TSPAN4-205ENST00000397406 KLRF2D3W0D1 207 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 SYT1P21579 422 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 SP3Q02447 781 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 PKP1Q13835 747 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 KIAA1755Q5JYT7 1200 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 FAM184AQ8NB25 1140 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 LZTS2Q9BRK4 669 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 RNF26Q9BY78 433 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 FRMPD2Q68DX3 1309 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-205ENST00000397406 PRPF3O43395 683 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 SMARCA1P28370 1054 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 GPATCH4Q5T3I0 446 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 GPAT2Q6NUI2 795 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 SPZ1Q9BXG8 430 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 ARHGAP39Q9C0H5 1083 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 AS3MTQ9HBK9 375 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
TSPAN4-205ENST00000397406 CYTH3O43739 400 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 PDCP20941 246 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 CTGFP29279 349 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 SLC1A4P43007 532 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 MLLT1Q03111 559 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 CCDC96Q2M329 555 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 PARP14Q460N5 1801 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 LARP1BQ659C4 914 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 TRIM22Q8IYM9 498 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 ADGRA2Q96PE1 1338 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 ZFYVE28Q9HCC9 887 aa19.62■□□□□ 0.73
TSPAN4-205ENST00000397406 RAD21O60216 631 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 TLR2O60603 784 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 DEXIO95424 95 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 NUCB2P80303 420 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 PKN1Q16512 942 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 ZNF280CQ8ND82 737 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 NUP88Q99567 741 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 FEZ1Q99689 392 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 CPVLQ9H3G5 476 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 RIOX1Q9H6W3 641 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 GPCPD1Q9NPB8 672 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 PTPN22Q9Y2R2 807 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 ZDHHC9Q9Y397 364 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 ZHX2Q9Y6X8 837 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 V9GY48 417 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 CENPFP49454 3210 aa19.61■□□□□ 0.73
TSPAN4-205ENST00000397406 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 STX6O43752 255 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 BRD1O95696 1058 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 BMP3P12645 472 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 SPP2Q13103 211 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 TTBK2Q6IQ55 1244 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 SPICE1Q8N0Z3 855 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 ERO1AQ96HE7 468 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 ZCCHC17Q9NP64 241 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 AFG3L2Q9Y4W6 797 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 TNRC18O15417 2968 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 LOC285556D6RIA3 1793 aa19.6■□□□□ 0.73
TSPAN4-205ENST00000397406 PDIA4P13667 645 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 MTMR2Q13614 643 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 C17orf99Q6UX52 265 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 ANKRD23Q86SG2 305 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 ALG1Q9BT22 464 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 MTMR6Q9Y217 621 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 MYH15Q9Y2K3 1946 aa19.59■□□□□ 0.73
TSPAN4-205ENST00000397406 ZSWIM8A7E2V4 1837 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 834.4 ms