RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RAPGEF2Q9Y4G8 1499 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 LIG3P49916 1009 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 CALCRLQ16602 461 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
SMU1-201ENST00000397149 ZNF148Q9UQR1 794 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 LIG4P49917 911 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 CCDC184Q52MB2 194 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 SGK1O00141 431 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
SMU1-201ENST00000397149 TMOD1P28289 359 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 AK2P54819 239 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
SMU1-201ENST00000397149 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 DDAH1O94760 285 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 TNNC2P02585 160 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PDZD4Q76G19 769 aaPredicted RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 MRFAP1L1Q96HT8 127 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 UBAP1LF5GYI3 381 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 BFSP1Q12934 665 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 RFX6Q8HWS3 928 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 TUBBP07437 444 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 ACTN1P12814 892 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 SF3B3Q15393 1217 aaKnown RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 SMAP1Q8IYB5 467 aaPredicted RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 NCLNQ969V3 563 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 DRC3Q9H069 523 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 KDRP35968 1356 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 CPA1P15085 419 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 NCF2P19878 526 aaPredicted RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 SLC1A4P43007 532 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 E2F5Q15329 346 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 SNX19Q92543 992 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PRKAG2Q9UGJ0 569 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PARP2Q9UGN5 583 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PTK2BQ14289 1009 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 C1orf228Q6PIY5 440 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 DNAAF3Q8N9W5 541 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 PIK3R4Q99570 1358 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 EPHB1P54762 984 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 MTX1Q13505 466 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 KIAA1841Q6NSI8 718 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 RINT1Q6NUQ1 792 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 NLRX1Q86UT6 975 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
SMU1-201ENST00000397149 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMU1-201ENST00000397149 FBXO2Q9UK22 296 aaPredicted RBP13.49□□□□□ -0.25
SMU1-201ENST00000397149 INHBAP08476 426 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 NSUN2Q08J23 767 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMU1-201ENST00000397149 MEIS3Q99687 375 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ESYT1Q9BSJ8 1104 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 TUBB4AP04350 444 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 YWHAEP62258 255 aaKnown RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 RNASELQ05823 741 aaKnown RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 TFCP2Q12800 502 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ZKSCAN8Q15776 578 aaPredicted RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 CROCCP2Q86T23 111 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 TEKT4Q8WW24 435 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 MRFAP1Q9Y605 127 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 MAIP1Q8WWC4 291 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 CDKL2Q92772 493 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 HPS4Q9NQG7 708 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 HIPK4Q8NE63 616 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 SLITRK6Q9H5Y7 841 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ERBINQ96RT1 1412 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 WDR91A4D1P6 747 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 TOM1L1O75674 476 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ART3Q13508 389 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 GPR162Q16538 588 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 TJAP1Q5JTD0 557 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
SMU1-201ENST00000397149 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
SMU1-201ENST00000397149 ATF2P15336 505 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 PALMDQ9NP74 551 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 THEGQ9P2T0 379 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms