RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 NBPF3Q9H094 633 aa13.43□□□□□ -0.26
ATN1-202ENST00000396684 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
ATN1-202ENST00000396684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATN1-202ENST00000396684 PSMD14O00487 310 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
ATN1-202ENST00000396684 ZBED4O75132 1171 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 ASNSP08243 561 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.263e-11■□□□□ 10.1
ATN1-202ENST00000396684 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 CTAGE1Q96RT6 745 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 LAD1O00515 517 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 GRIK5Q16478 980 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 HAUS3Q68CZ6 603 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 TBCKQ8TEA7 893 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
ATN1-202ENST00000396684 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 TECP42680 631 aa13.42□□□□□ -0.26
ATN1-202ENST00000396684 STAT2P52630 851 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
ATN1-202ENST00000396684 ARID3AQ99856 593 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 SPZ1Q9BXG8 430 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
ATN1-202ENST00000396684 BARHL2Q9NY43 387 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 MRPL11Q9Y3B7 192 aaKnown RBP13.41□□□□□ -0.26
ATN1-202ENST00000396684 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
ATN1-202ENST00000396684 PTPREP23469 700 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 NFIAQ12857 509 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
ATN1-202ENST00000396684 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 SPEF2Q9C093 1822 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 TGFB2P61812 414 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 GPR162Q16538 588 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 CLEC10AQ8IUN9 316 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 CPLX3Q8WVH0 158 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 HOMER2Q9NSB8 354 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
ATN1-202ENST00000396684 FOSP01100 380 aaPredicted RBP13.4□□□□□ -0.26
ATN1-202ENST00000396684 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
ATN1-202ENST00000396684 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 ZBTB5O15062 677 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 SPON1Q9HCB6 807 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
ATN1-202ENST00000396684 CSADQ9Y600 493 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 F5H6K3 240 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 KLRC3Q07444 240 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 CCDC40Q4G0X9 1142 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 NSMFQ6X4W1 530 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 STXBP4Q6ZWJ1 553 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 PHF20Q9BVI0 1012 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 PCDHA12Q9UN75 941 aa13.4□□□□□ -0.26
ATN1-202ENST00000396684 FOXP2O15409 715 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 FLOT1O75955 427 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 PDE4DQ08499 809 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 NTRK3Q16288 839 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 DCPSQ96C86 337 aaKnown RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 BLZF1Q9H2G9 400 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 BICDL2A1A5D9 508 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 GCOM1H8Y6P7 765 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 ARL6IP4Q66PJ3 421 aaKnown RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 TRIML1Q8N9V2 468 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 RGS22Q8NE09 1264 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 GAKO14976 1311 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 ALAS1P13196 640 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 ZNF75DP51815 510 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 PRR16Q569H4 304 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
ATN1-202ENST00000396684 MAPK8IP1Q9UQF2 711 aa13.39□□□□□ -0.27
ATN1-202ENST00000396684 SYNRGQ9UMZ2 1314 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 PTGS1P23219 599 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 PPP1R2P41236 205 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
ATN1-202ENST00000396684 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
ATN1-202ENST00000396684 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 DACT2Q5SW24 774 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 FAM151AQ8WW52 585 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
ATN1-202ENST00000396684 CTNND2Q9UQB3 1225 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms