RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KIFC2Q96AC6 838 aa21.74■■□□□ 1.07
FXN-203ENST00000396366 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
FXN-203ENST00000396366 DNAH12Q6ZR08 3092 aa21.74■■□□□ 1.07
FXN-203ENST00000396366 FGAP02671 866 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 ALX1Q15699 326 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 SNRNP48Q6IEG0 339 aaKnown RBP21.73■■□□□ 1.07
FXN-203ENST00000396366 CPXCR1Q8N123 301 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 GMCL1P1Q8NEA9 526 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 SLC5A4Q9NY91 659 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 ANAPC4Q9UJX5 808 aa21.73■■□□□ 1.07
FXN-203ENST00000396366 ZMYND8Q9ULU4 1186 aaPredicted RBP21.73■■□□□ 1.07
FXN-203ENST00000396366 KCTD2Q14681 263 aa21.72■■□□□ 1.07
FXN-203ENST00000396366 RAVER2Q9HCJ3 691 aaKnown RBP21.72■■□□□ 1.07
FXN-203ENST00000396366 PLXNA1Q9UIW2 1896 aa21.72■■□□□ 1.07
FXN-203ENST00000396366 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 RANBP6O60518 1105 aaKnown RBP21.71■■□□□ 1.07
FXN-203ENST00000396366 ZBED4O75132 1171 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 HSPD1P10809 573 aaKnown RBP21.71■■□□□ 1.07
FXN-203ENST00000396366 BMP3P12645 472 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 SYN1P17600 705 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
FXN-203ENST00000396366 LRRC26Q2I0M4 334 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 RASGRP2Q7LDG7 609 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 TEX13BQ9BXU2 312 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 FEM1BQ9UK73 627 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 SYNPO2Q9UMS6 1093 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 STX8Q9UNK0 236 aa21.71■■□□□ 1.07
FXN-203ENST00000396366 TMEM232C9JQI7 657 aa21.7■■□□□ 1.06
FXN-203ENST00000396366 TAL1P17542 331 aaPredicted RBP21.7■■□□□ 1.06
FXN-203ENST00000396366 SDSP20132 328 aa21.7■■□□□ 1.06
FXN-203ENST00000396366 MCCP23508 829 aa21.7■■□□□ 1.06
FXN-203ENST00000396366 GJC2Q5T442 439 aaPredicted RBP21.7■■□□□ 1.06
FXN-203ENST00000396366 SENP6Q9GZR1 1112 aaPredicted RBP21.7■■□□□ 1.06
FXN-203ENST00000396366 OSBPL3Q9H4L5 887 aa21.7■■□□□ 1.06
FXN-203ENST00000396366 SLC38A10Q9HBR0 1119 aa21.7■■□□□ 1.06
FXN-203ENST00000396366 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
FXN-203ENST00000396366 SMCHD1A6NHR9 2005 aa21.69■■□□□ 1.06
FXN-203ENST00000396366 MSCO60682 206 aa21.69■■□□□ 1.06
FXN-203ENST00000396366 FGRP09769 529 aa21.69■■□□□ 1.06
FXN-203ENST00000396366 HAND2P61296 217 aa21.69■■□□□ 1.06
FXN-203ENST00000396366 SZT2Q5T011 3432 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 ATP2A1O14983 1001 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 SEPT4O43236 478 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 ORC4O43929 436 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 RRP12Q5JTH9 1297 aaKnown RBP21.68■■□□□ 1.06
FXN-203ENST00000396366 TICAM2Q86XR7 235 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 TINF2Q9BSI4 451 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 MTMR7Q9Y216 660 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 CTDP1Q9Y5B0 961 aaPredicted RBP21.68■■□□□ 1.06
FXN-203ENST00000396366 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
FXN-203ENST00000396366 MYCNP04198 464 aaPredicted RBP21.67■■□□□ 1.06
FXN-203ENST00000396366 COPB2P35606 906 aa21.67■■□□□ 1.06
FXN-203ENST00000396366 SLC1A4P43007 532 aa21.67■■□□□ 1.06
FXN-203ENST00000396366 SNAP25P60880 206 aa21.67■■□□□ 1.06
FXN-203ENST00000396366 KCTD1Q719H9 257 aa21.67■■□□□ 1.06
FXN-203ENST00000396366 GMCL1Q96IK5 515 aa21.67■■□□□ 1.06
FXN-203ENST00000396366 DIS3Q9Y2L1 958 aaKnown RBP21.67■■□□□ 1.06
FXN-203ENST00000396366 DNM1LO00429 736 aa21.66■■□□□ 1.06
FXN-203ENST00000396366 ATN1P54259 1190 aaPredicted RBP21.66■■□□□ 1.06
FXN-203ENST00000396366 CWC27Q6UX04 472 aaKnown RBP21.66■■□□□ 1.06
FXN-203ENST00000396366 STAG1Q8WVM7 1258 aa21.66■■□□□ 1.06
FXN-203ENST00000396366 DDX11Q96FC9 970 aa21.66■■□□□ 1.06
FXN-203ENST00000396366 HOMER2Q9NSB8 354 aa21.66■■□□□ 1.06
FXN-203ENST00000396366 DNAJC25-GNG10A0A024R161 153 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 PDE4AP27815 886 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 NOVP48745 357 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 STAT2P52630 851 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 IKQ13123 557 aaPredicted RBP21.65■■□□□ 1.06
FXN-203ENST00000396366 RCSD1Q6JBY9 416 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 AGBL1Q96MI9 1066 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 GDF15Q99988 308 aa21.65■■□□□ 1.06
FXN-203ENST00000396366 ZNF536O15090 1300 aa21.64■■□□□ 1.05
FXN-203ENST00000396366 ZNF865P0CJ78 1059 aaPredicted RBP21.64■■□□□ 1.05
FXN-203ENST00000396366 TBC1D10CQ8IV04 446 aa21.64■■□□□ 1.05
FXN-203ENST00000396366 ARRDC4Q8NCT1 418 aa21.64■■□□□ 1.05
FXN-203ENST00000396366 CHURC1Q8WUH1 139 aa21.64■■□□□ 1.05
FXN-203ENST00000396366 LENG1Q96BZ8 264 aaPredicted RBP21.64■■□□□ 1.05
FXN-203ENST00000396366 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 SNAI1O95863 264 aaPredicted RBP21.63■■□□□ 1.05
FXN-203ENST00000396366 MAGEA10P43363 369 aaPredicted RBP21.63■■□□□ 1.05
FXN-203ENST00000396366 OAZ1P54368 228 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 LRRC41Q15345 812 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 PPP4R3BQ5MIZ7 849 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 FAM160B2Q86V87 743 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 ANKRD35Q8N283 1001 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 FGD4Q96M96 766 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 TMEM47Q9BQJ4 181 aa21.63■■□□□ 1.05
FXN-203ENST00000396366 AKNAD1Q5T1N1 836 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 TTBK2Q6IQ55 1244 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 CCDC174Q6PII3 467 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 CHST13Q8NET6 341 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 FERMT2Q96AC1 680 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 NRBP1Q9UHY1 535 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 PRR12Q9ULL5 1215 aa21.62■■□□□ 1.05
FXN-203ENST00000396366 KBTBD13C9JR72 458 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 PGK1P00558 417 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 SLC16A2P36021 539 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 ADCYAP1R1P41586 468 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms