RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 Q3C1V9 767 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 ASPRV1Q53RT3 343 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 BTNL9Q6UXG8 535 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 RUFY3Q7L099 469 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 ZNF654Q8IZM8 581 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 CTDP1Q9Y5B0 961 aaPredicted RBP22.43■■□□□ 1.18
HOXA9-202ENST00000396345 ECM2O94769 699 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-202ENST00000396345 SLC16A2P36021 539 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 TROAPQ12815 778 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 SYDE2Q5VT97 1194 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 Q6ZUG5 572 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 SGMS1Q86VZ5 419 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 ARHGAP39Q9C0H5 1083 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 PRR12Q9ULL5 1215 aa22.42■■□□□ 1.18
HOXA9-202ENST00000396345 COL11A1P12107 1806 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-202ENST00000396345 DDAH1O94760 285 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 FDX1P10109 184 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 PSMC4P43686 418 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 CCNA1P78396 465 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 PLS1Q14651 629 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 GRM4Q14833 912 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 TMEM132BQ14DG7 1078 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 ARHGEF6Q15052 776 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 REPS2Q8NFH8 660 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 NUP133Q8WUM0 1156 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 UPF3BQ9BZI7 483 aaKnown RBP22.41■■□□□ 1.18
HOXA9-202ENST00000396345 SPATC1LQ9H0A9 340 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 UPF2Q9HAU5 1272 aaKnown RBP22.41■■□□□ 1.18
HOXA9-202ENST00000396345 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 MAD2L2Q9UI95 211 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 SLC12A7Q9Y666 1083 aa22.41■■□□□ 1.18
HOXA9-202ENST00000396345 FMNL1O95466 1100 aaPredicted RBP22.4■■□□□ 1.18
HOXA9-202ENST00000396345 CTGFP29279 349 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 FCGRTP55899 365 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 SYNE3Q6ZMZ3 975 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 CCAR1Q8IX12 1150 aaKnown RBP22.4■■□□□ 1.18
HOXA9-202ENST00000396345 IL17RAQ96F46 866 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 MYL10Q9BUA6 226 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 C22orf23Q9BZE7 217 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 UBA5Q9GZZ9 404 aa22.4■■□□□ 1.18
HOXA9-202ENST00000396345 MGAMO43451 1857 aa22.39■■□□□ 1.18
HOXA9-202ENST00000396345 ZSWIM8A7E2V4 1837 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 PALM3A6NDB9 673 aaPredicted RBP22.39■■□□□ 1.17
HOXA9-202ENST00000396345 CALM1P0DP23 149 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 CALM2P0DP24 149 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 CALM3P0DP25 149 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 CAP1Q01518 475 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 STAG2Q8N3U4 1231 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 FBXL16Q8N461 479 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 TRIM47Q96LD4 638 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 MAP3K14Q99558 947 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 MOV10L1Q9BXT6 1211 aaKnown RBP22.39■■□□□ 1.17
HOXA9-202ENST00000396345 BACH2Q9BYV9 841 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 PORCNQ9H237 461 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 EFCC1Q9HA90 598 aa22.39■■□□□ 1.17
HOXA9-202ENST00000396345 KLRF2D3W0D1 207 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 MAPK4P31152 587 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 STAT3P40763 770 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 SNAP25P60880 206 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
HOXA9-202ENST00000396345 CTCFLQ8NI51 663 aaPredicted RBP22.38■■□□□ 1.17
HOXA9-202ENST00000396345 BRF1Q92994 677 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 CPVLQ9H3G5 476 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 PDRG1Q9NUG6 133 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 ZNF214Q9UL59 606 aaPredicted RBP22.38■■□□□ 1.17
HOXA9-202ENST00000396345 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
HOXA9-202ENST00000396345 KLF18A0A0U1RQI7 1052 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 TNPO2O14787 897 aaKnown RBP22.37■■□□□ 1.17
HOXA9-202ENST00000396345 RXRAP19793 462 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 KIF5BP33176 963 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 APOBRQ0VD83 1088 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 APOA5Q6Q788 366 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 OTOP1Q7RTM1 612 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 RAB11FIP4Q86YS3 637 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 AGXT2Q9BYV1 514 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 RANBP17Q9H2T7 1088 aaKnown RBP22.37■■□□□ 1.17
HOXA9-202ENST00000396345 CWC22Q9HCG8 908 aaKnown RBP22.37■■□□□ 1.17
HOXA9-202ENST00000396345 RAVER2Q9HCJ3 691 aaKnown RBP22.37■■□□□ 1.17
HOXA9-202ENST00000396345 TRIM17Q9Y577 477 aa22.37■■□□□ 1.17
HOXA9-202ENST00000396345 ATP2A1O14983 1001 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 SLC25A27O95847 323 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 GNRH1P01148 92 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 OAZ1P54368 228 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 WDR78Q5VTH9 848 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
HOXA9-202ENST00000396345 CCDC174Q6PII3 467 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 MICU3Q86XE3 530 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 RIOX2Q8IUF8 465 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 CCDC144CPQ8IYA2 1237 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 ADGRF4Q8IZF3 695 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 SHCBP1Q8NEM2 672 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 COA7Q96BR5 231 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 TEX13BQ9BXU2 312 aa22.36■■□□□ 1.17
HOXA9-202ENST00000396345 NAP1L2Q9ULW6 460 aaPredicted RBP22.36■■□□□ 1.17
HOXA9-202ENST00000396345 ZBTB43O43298 467 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 DHX16O60231 1041 aaKnown RBP22.35■■□□□ 1.17
HOXA9-202ENST00000396345 ERCC3P19447 782 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 HOXD10P28358 340 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 SLC4A3P48751 1232 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms