RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
GTF2A2-202ENST00000396060 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
GTF2A2-202ENST00000396060 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 PLA2G6O60733 806 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 PTPREP23469 700 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 SLC1A4P43007 532 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 MRE11P49959 708 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 HEATR3Q7Z4Q2 680 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 C6orf50Q9HD87 102 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 DACT1Q9NYF0 836 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 ZNF112Q9UJU3 913 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
GTF2A2-202ENST00000396060 SYCE3A1L190 88 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 ZBTB5O15062 677 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 CTAGE5O15320 804 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 CTNND1O60716 968 aaKnown RBP13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 NDUFB10O96000 172 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 YBX3P16989 372 aaKnown RBP eCLIP13.62□□□□□ -0.232e-10■□□□□ 10.2
GTF2A2-202ENST00000396060 TTBK2Q6IQ55 1244 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 NUP62CLQ9H1M0 184 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 CPVLQ9H3G5 476 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 PCDHB6Q9Y5E3 794 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 SRPRBQ9Y5M8 271 aaKnown RBP13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 NR1I2O75469 434 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 BMP3P12645 472 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 NAPAP54920 295 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 MIGA2Q7L4E1 593 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 HPSEQ9Y251 543 aa13.62□□□□□ -0.23
GTF2A2-202ENST00000396060 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 ORC2Q13416 577 aaPredicted RBP13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 DCAF15Q66K64 600 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 ELOA2Q8IYF1 753 aaPredicted RBP13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
GTF2A2-202ENST00000396060 ASTN2O75129 1339 aaPredicted RBP13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 EPS15P42566 896 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 MAP3K11Q16584 847 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 VCPKMTQ9H867 229 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 ADARB2Q9NS39 739 aaKnown RBP13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
GTF2A2-202ENST00000396060 CCDC194A0A1B0GVG4 234 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 TRAF1Q13077 416 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 SYDE2Q5VT97 1194 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 ANGEL2Q5VTE6 544 aaKnown RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 TSPY26PQ9H489 355 aa13.59□□□□□ -0.23
GTF2A2-202ENST00000396060 KINO60870 393 aaKnown RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms