RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 DSC3Q14574 896 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 CPSF6Q16630 551 aaKnown RBP eCLIP7.74□□□□□ -1.17
AP3S1-202ENST00000395548 AKAP4Q5JQC9 854 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 DYMQ7RTS9 669 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
AP3S1-202ENST00000395548 GLIS3Q8NEA6 775 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 EZH1Q92800 747 aaPredicted RBP7.74□□□□□ -1.17
AP3S1-202ENST00000395548 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 SAGE1Q9NXZ1 904 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 SYNGAP1Q96PV0 1343 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 TIAM2Q8IVF5 1701 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.73□□□□□ -1.17
AP3S1-202ENST00000395548 TREHO43280 583 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 HMGB1P09429 215 aaKnown RBP7.73□□□□□ -1.17
AP3S1-202ENST00000395548 PPP2R3AQ06190 1150 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 MAP7Q14244 749 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 FBXL6Q8N531 539 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 HHIPL1Q96JK4 782 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
AP3S1-202ENST00000395548 OSBPL1AQ9BXW6 950 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 HACL1Q9UJ83 578 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 LEMD3Q9Y2U8 911 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 ACTL7BQ9Y614 415 aa7.73□□□□□ -1.17
AP3S1-202ENST00000395548 UBR3Q6ZT12 1888 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 PNMA6FA0A0J9YX94 578 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 CHRNA5P30532 468 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 FCGRTP55899 365 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
AP3S1-202ENST00000395548 TTLL6Q8N841 843 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 ZCRB1Q8TBF4 217 aaKnown RBP7.72□□□□□ -1.17
AP3S1-202ENST00000395548 BCO2Q9BYV7 579 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 AP4E1Q9UPM8 1137 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 C4AP0C0L4 1744 aa7.72□□□□□ -1.17
AP3S1-202ENST00000395548 TAF1LQ8IZX4 1826 aa7.71□□□□□ -1.17
AP3S1-202ENST00000395548 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 ECEL1O95672 775 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 F13BP05160 661 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 SLFN14P0C7P3 912 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 PLA2G5P39877 138 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 ASPAP45381 313 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 RBM25P49756 843 aaKnown RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 ZNF157P51786 506 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 MFAP1P55081 439 aaKnown RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 FAAP100Q0VG06 881 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 NOGQ13253 232 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 FAM122AQ96E09 287 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 TBC1D32Q96NH3 1257 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 GZF1Q9H116 711 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 TMEM39AQ9NV64 488 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 GPN3Q9UHW5 284 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-202ENST00000395548 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 DOT1LQ8TEK3 1739 aa7.71□□□□□ -1.18
AP3S1-202ENST00000395548 UNC80Q8N2C7 3258 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 TOGARAM1Q9Y4F4 1720 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 RGPD5Q99666 1765 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 PATL2C9JE40 543 aaKnown RBP7.7□□□□□ -1.18
AP3S1-202ENST00000395548 NFICP08651 508 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 SPINK2P20155 84 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 RAB6AP20340 208 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 EPHX2P34913 555 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 RFC4P35249 363 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.7□□□□□ -1.18
AP3S1-202ENST00000395548 PI16Q6UXB8 463 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 DTX1Q86Y01 620 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 ANKRD24Q8TF21 1146 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 WDR18Q9BV38 432 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 GSX1Q9H4S2 264 aaPredicted RBP7.7□□□□□ -1.18
AP3S1-202ENST00000395548 PRKAG2Q9UGJ0 569 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 SCN4AP35499 1836 aa7.7□□□□□ -1.18
AP3S1-202ENST00000395548 GYS1P13807 737 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 CYP27A1Q02318 531 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 ZAR1Q86SH2 424 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 FBF1Q8TES7 1133 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 KRT82Q9NSB4 513 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 FAM105AQ9NUU6 356 aa7.69□□□□□ -1.18
AP3S1-202ENST00000395548 TRIOBPQ9H2D6 2365 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 WNT11O96014 354 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 GSTP1P09211 210 aaKnown RBP7.68□□□□□ -1.18
AP3S1-202ENST00000395548 FOSL1P15407 271 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 LIG1P18858 919 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 NXPE4Q6UWF7 544 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 SAPCD2Q86UD0 394 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 LINC00116Q8NCU8 138 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 ASB16Q96NS5 453 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 SRCIN1Q9C0H9 1055 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 SEMA6CQ9H3T2 930 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 CCDC86Q9H6F5 360 aaKnown RBP7.68□□□□□ -1.18
AP3S1-202ENST00000395548 AKAP2Q9Y2D5 859 aa7.68□□□□□ -1.18
AP3S1-202ENST00000395548 MAPK8P45983 427 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 GP2P55259 537 aaKnown RBP7.67□□□□□ -1.18
AP3S1-202ENST00000395548 CST9Q5W186 159 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
AP3S1-202ENST00000395548 ALG1LQ6GMV1 187 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms