RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 FAM177A1Q8N128 213 aaPredicted RBP28.24■■■□□ 2.11
CTF1-202ENST00000395019 LINC00301Q8NCQ3 95 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 RIOX1Q9H6W3 641 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 CLIC4Q9Y696 253 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 GOLGA6L4A6NEF3 574 aa28.23■■■□□ 2.11
CTF1-202ENST00000395019 PPP1R12BO60237 982 aaPredicted RBP28.23■■■□□ 2.11
CTF1-202ENST00000395019 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.23■■■□□ 2.11
CTF1-202ENST00000395019 BRMS1Q9HCU9 246 aa28.23■■■□□ 2.11
CTF1-202ENST00000395019 CAP2P40123 477 aa28.22■■■□□ 2.11
CTF1-202ENST00000395019 NR5A1Q13285 461 aa28.22■■■□□ 2.11
CTF1-202ENST00000395019 NPY5RQ15761 445 aa28.22■■■□□ 2.11
CTF1-202ENST00000395019 GPATCH4Q5T3I0 446 aaKnown RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 CCDC84Q86UT8 332 aaPredicted RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 OXER1Q8TDS5 423 aa28.22■■■□□ 2.11
CTF1-202ENST00000395019 GBA2Q9HCG7 927 aaPredicted RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 SYNPO2Q9UMS6 1093 aa28.22■■■□□ 2.11
CTF1-202ENST00000395019 FRMPD2Q68DX3 1309 aaPredicted RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 BAZ2BQ9UIF8 2168 aaKnown RBP28.22■■■□□ 2.11
CTF1-202ENST00000395019 FSTL1Q12841 308 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 ZSCAN23Q3MJ62 389 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 KCNG4Q8TDN1 519 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 RRP36Q96EU6 259 aaKnown RBP28.21■■■□□ 2.11
CTF1-202ENST00000395019 CLMNQ96JQ2 1002 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 CPVLQ9H3G5 476 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 CALML3P27482 149 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 NLRP5P59047 1200 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 VGLL4Q14135 290 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 STK38Q15208 465 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 MAP3K11Q16584 847 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 DCAF4Q8WV16 495 aa28.21■■■□□ 2.11
CTF1-202ENST00000395019 GMCL1P1Q8NEA9 526 aa28.2■■■□□ 2.1
CTF1-202ENST00000395019 UBA5Q9GZZ9 404 aa28.2■■■□□ 2.1
CTF1-202ENST00000395019 BARHL2Q9NY43 387 aa28.2■■■□□ 2.1
CTF1-202ENST00000395019 ZBTB21Q9ULJ3 1066 aa28.2■■■□□ 2.1
CTF1-202ENST00000395019 IREB2P48200 963 aaKnown RBP28.19■■■□□ 2.1
CTF1-202ENST00000395019 ZNF445P59923 1031 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 TPRNQ4KMQ1 711 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 RILPL1Q5EBL4 403 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 SLFN13Q68D06 897 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 WWC2Q6AWC2 1192 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 CCDC148Q8NFR7 591 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 GPKOWQ92917 476 aaPredicted RBP eCLIP28.19■■■□□ 2.1
CTF1-202ENST00000395019 GPCPD1Q9NPB8 672 aa28.19■■■□□ 2.1
CTF1-202ENST00000395019 CTNND1O60716 968 aaKnown RBP28.18■■■□□ 2.1
CTF1-202ENST00000395019 MAP3K9P80192 1104 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 ARMC9Q7Z3E5 817 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 TNFRSF25Q93038 417 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 SEC63Q9UGP8 760 aaKnown RBP28.18■■■□□ 2.1
CTF1-202ENST00000395019 SNCAIPQ9Y6H5 919 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 STXBP3O00186 592 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 SPTLC2O15270 562 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 SLC39A14Q15043 492 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 SF3A1Q15459 793 aaKnown RBP28.18■■■□□ 2.1
CTF1-202ENST00000395019 CCDC96Q2M329 555 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 LDLRAD1Q5T700 205 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 GALNT17Q6IS24 598 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 CNKSR2Q8WXI2 1034 aa28.18■■■□□ 2.1
CTF1-202ENST00000395019 TOB1P50616 345 aaPredicted RBP28.17■■■□□ 2.1
CTF1-202ENST00000395019 CCDC183Q5T5S1 534 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 HEATR3Q7Z4Q2 680 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 SCYL3Q8IZE3 742 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 C2orf69Q8N8R5 385 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 PIGSQ96S52 555 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 VAT1LQ9HCJ6 419 aa28.17■■■□□ 2.1
CTF1-202ENST00000395019 PTPRFP10586 1907 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 F5H6K3 240 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 hCG_1984214I3L0E3 225 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 ME1P48163 572 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 KLRC3Q07444 240 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 PTPAQ15257 358 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 TYW1BQ6NUM6 668 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 ZNF713Q8N859 430 aaPredicted RBP28.16■■■□□ 2.1
CTF1-202ENST00000395019 BICD2Q8TD16 824 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 GMCL1Q96IK5 515 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 ARHGEF10LQ9HCE6 1279 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 PCDHA7Q9UN72 937 aa28.16■■■□□ 2.1
CTF1-202ENST00000395019 LIG1P18858 919 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 SLC1A4P43007 532 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 NOL9Q5SY16 702 aaKnown RBP28.15■■■□□ 2.1
CTF1-202ENST00000395019 TTBK2Q6IQ55 1244 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 HOMER1Q86YM7 354 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 DAGLBQ8NCG7 672 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 CCDC12Q8WUD4 166 aaPredicted RBP28.15■■■□□ 2.1
CTF1-202ENST00000395019 ELP3Q9H9T3 547 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 PCDHA4Q9UN74 947 aa28.15■■■□□ 2.1
CTF1-202ENST00000395019 FKBP1BP68106 108 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 ADALQ6DHV7 355 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 KCTD1Q719H9 257 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 ANKRD13AQ8IZ07 590 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 BLIDQ8IZY5 108 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 JMJD4Q9H9V9 463 aa28.14■■■□□ 2.1
CTF1-202ENST00000395019 ISY1Q9ULR0 285 aaKnown RBP28.14■■■□□ 2.1
CTF1-202ENST00000395019 A0A1W2PQ27 194 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 A0A1W2PQ64 194 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 A0A1W2PQD8 194 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 A0A1W2PRG0 241 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 PPP6R2O75170 966 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 NDUFB10O96000 172 aa28.14■■■□□ 2.09
CTF1-202ENST00000395019 ADGRF4Q8IZF3 695 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms