RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 RGS16O15492 202 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 INPP5BP32019 993 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 EFHBQ8N7U6 833 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 PKD2L1Q9P0L9 805 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 IGBP1P78318 339 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 TBCCQ15814 346 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 GPR162Q16538 588 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 RSRC2Q7L4I2 434 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ENOX1Q8TC92 643 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 KCNH3Q9ULD8 1083 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 CHEK2O96017 543 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 CA4P22748 312 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 MYO1EQ12965 1108 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 NXNQ6DKJ4 435 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 LRRC37BQ96QE4 947 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 OSBPP22059 807 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 NACC1Q96RE7 527 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ITM2BQ9Y287 266 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ZSCAN20P17040 1043 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ESRRGP62508 458 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 CABS1Q96KC9 395 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 MMS19Q96T76 1030 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 CNPY2Q9Y2B0 182 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 MED7O43513 233 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ABL1P00519 1130 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 KCTD2Q14681 263 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 CEP85Q6P2H3 762 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 SYF2O95926 243 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 TTC38Q5R3I4 469 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 CTAGE3PQ8IX95 158 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 NME8Q8N427 588 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ANO3Q9BYT9 981 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 KIF9Q9HAQ2 790 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PPP2R3CQ969Q6 453 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 OTUB1Q96FW1 271 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 SCYL1Q96KG9 808 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 IQSEC3Q9UPP2 1182 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 MBD4O95243 580 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 RHOXF2BP0C7M4 288 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 POLGP54098 1239 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PLBD2Q8NHP8 589 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 RHOXF2Q9BQY4 288 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ARL13BQ3SXY8 428 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 FASTKD5Q7L8L6 764 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ANKRD36BP1Q96IX9 119 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 C14orf93Q9H972 538 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 TRAPPC8Q9Y2L5 1435 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 NSMFQ6X4W1 530 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ANKRD35Q8N283 1001 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PDCD7Q8N8D1 485 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 SUDS3Q9H7L9 328 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 IFNKQ9P0W0 207 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 CDV3Q9UKY7 258 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 C16orf72Q14CZ0 275 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 LZICQ8WZA0 190 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 ERO1AQ96HE7 468 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
SYNE2-205ENST00000394768 RABEP2Q9H5N1 569 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 LAD1O00515 517 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PSMA3P25788 255 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 LPIN2Q92539 896 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 UBN1Q9NPG3 1134 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 OLFML3Q9NRN5 406 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 WASHC5Q12768 1159 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 SURF1Q15526 300 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 TSC1Q92574 1164 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 TRPV6Q9H1D0 765 aa8.13□□□□□ -1.11
SYNE2-205ENST00000394768 GNGT2O14610 69 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 HIP1RO75146 1068 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 FBXW4P57775 412 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 RSBN1LQ6PCB5 846 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 APPBP2Q92624 585 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 TXNDC9O14530 226 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 GPC4O75487 556 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 POLR2MP0CAP2 368 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PAMP19021 973 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 ARHGDIAP52565 204 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 RNF219Q5W0B1 726 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 NEUROG2Q9H2A3 272 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 NPATQ14207 1427 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms