RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 ANO10Q9NW15 660 aa7.55□□□□□ -1.2
SGMS2-203ENST00000394686 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
SGMS2-203ENST00000394686 BECN2A8MW95 431 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 TMCO5BA8MYB1 307 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 NPHP1O15259 732 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 ZSCAN12O43309 604 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 TOM1O60784 492 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 KATNA1O75449 491 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 ERLIN1O75477 346 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 PF4P02776 101 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 LIG1P18858 919 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 GJB2P29033 226 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 EVCP57679 992 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 C2orf27AQ580R0 203 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 VPS53Q5VIR6 699 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 RSRC2Q7L4I2 434 aaKnown RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 HDXQ7Z353 690 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 THNSL2Q86YJ6 484 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 RELL1Q8IUW5 271 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 OTUD7AQ8TE49 926 aaPredicted RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 NOC4LQ9BVI4 516 aaKnown RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 UBA5Q9GZZ9 404 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 GBP3Q9H0R5 595 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 BSDC1Q9NW68 430 aaPredicted RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 WDHD1O75717 1129 aaPredicted RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 MYCLP1P12525 358 aaPredicted RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 TWISTNBQ3B726 338 aaPredicted RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 GLIS3Q8NEA6 775 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 FAM71BQ8TC56 605 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 GOLGA1Q92805 767 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 ARPC5LQ9BPX5 153 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 UPF3BQ9BZI7 483 aaKnown RBP7.54□□□□□ -1.2
SGMS2-203ENST00000394686 SLC12A5Q9H2X9 1139 aa7.54□□□□□ -1.2
SGMS2-203ENST00000394686 RPGRIP1LQ68CZ1 1315 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 KCNQ2O43526 872 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 SFPQP23246 707 aaKnown RBP eCLIP7.53□□□□□ -1.2
SGMS2-203ENST00000394686 AK2P54819 239 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
SGMS2-203ENST00000394686 PPP2R5AQ15172 486 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 LONRF2Q1L5Z9 754 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 SEZ6Q53EL9 994 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 C10orf62Q5T681 223 aaPredicted RBP7.53□□□□□ -1.2
SGMS2-203ENST00000394686 LRCH2Q5VUJ6 765 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 TTLL5Q6EMB2 1281 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 ZNF438Q7Z4V0 828 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 NT5C1AQ9BXI3 368 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
SGMS2-203ENST00000394686 ZCCHC17Q9NP64 241 aaKnown RBP7.53□□□□□ -1.2
SGMS2-203ENST00000394686 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 MICAL2O94851 1124 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 SEC31AO94979 1220 aaKnown RBP7.52□□□□□ -1.2
SGMS2-203ENST00000394686 GJB6O95452 261 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 CELA3AP09093 270 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 KCNA6P17658 529 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 RAB27AP51159 221 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 DDR1Q08345 913 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 SART3Q15020 963 aaKnown RBP7.52□□□□□ -1.2
SGMS2-203ENST00000394686 CAMK4Q16566 473 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 RUFY3Q7L099 469 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 LRP10Q7Z4F1 713 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 PODNQ7Z5L7 613 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 CEP57L1Q8IYX8 460 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 PHC3Q8NDX5 983 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 STRIP2Q9ULQ0 834 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 SNX14Q9Y5W7 946 aa7.52□□□□□ -1.2
SGMS2-203ENST00000394686 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
SGMS2-203ENST00000394686 GREM1O60565 184 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 ERLIN2O94905 339 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 GNRH1P01148 92 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 FCGRTP55899 365 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 WNT7BP56706 349 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 HSP90B2PQ58FF3 399 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 TRIM65Q6PJ69 517 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 TMTC2Q8N394 836 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 C1orf127Q8N9H9 656 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 ERCC4Q92889 916 aaPredicted RBP7.52□□□□□ -1.21
SGMS2-203ENST00000394686 HSH2DQ96JZ2 352 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 SMAD5Q99717 465 aaKnown RBP7.52□□□□□ -1.21
SGMS2-203ENST00000394686 CARD6Q9BX69 1037 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 PARD6BQ9BYG5 372 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 HYPKQ9NX55 129 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 RAB21Q9UL25 225 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 TRAK1Q9UPV9 953 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 EVC2Q86UK5 1308 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 ADAMTS13Q76LX8 1427 aa7.52□□□□□ -1.21
SGMS2-203ENST00000394686 UBAP1LF5GYI3 381 aa7.51□□□□□ -1.21
SGMS2-203ENST00000394686 GOLIM4O00461 696 aa7.51□□□□□ -1.21
SGMS2-203ENST00000394686 CDK2AP1O14519 115 aa7.51□□□□□ -1.21
SGMS2-203ENST00000394686 GIPC1O14908 333 aa7.51□□□□□ -1.21
SGMS2-203ENST00000394686 PRPF3O43395 683 aaKnown RBP7.51□□□□□ -1.21
SGMS2-203ENST00000394686 MYO1BO43795 1136 aa7.51□□□□□ -1.21
SGMS2-203ENST00000394686 PHACTR2O75167 634 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms