RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 FAM200AQ8TCP9 573 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 ANP32BQ92688 251 aaKnown RBP17.12■□□□□ 0.33
CCT4-201ENST00000394440 SEC63Q9UGP8 760 aaKnown RBP17.12■□□□□ 0.33
CCT4-201ENST00000394440 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 GDF11O95390 407 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 SYKP43405 635 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 MMP14P50281 582 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 PRELPP51888 382 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
CCT4-201ENST00000394440 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
CCT4-201ENST00000394440 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
CCT4-201ENST00000394440 WNT10BO00744 389 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
CCT4-201ENST00000394440 ICA1Q05084 483 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 TNIP1Q15025 636 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 NAPAP54920 295 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 ZNF280AP59817 542 aaPredicted RBP17.11■□□□□ 0.33
CCT4-201ENST00000394440 ANO6Q4KMQ2 910 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
CCT4-201ENST00000394440 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
CCT4-201ENST00000394440 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 RASSF7Q02833 373 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 VAT1LQ9HCJ6 419 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 TTBK2Q6IQ55 1244 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
CCT4-201ENST00000394440 FZD9O00144 591 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 TBC1D12O60347 775 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 GH2P01242 217 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 ZNF174Q15697 407 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 RBM26Q5T8P6 1007 aaKnown RBP17.09■□□□□ 0.33
CCT4-201ENST00000394440 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCT4-201ENST00000394440 VEZTQ9HBM0 779 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 CAVIN2O95810 425 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 STX1AQ16623 288 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
CCT4-201ENST00000394440 SMCO2A6NFE2 343 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 MYO1BO43795 1136 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 GNA11P29992 359 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 PTGDRQ13258 359 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 CCDC96Q2M329 555 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 KCTD1Q719H9 257 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.33
CCT4-201ENST00000394440 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 C6orf50Q9HD87 102 aa17.08■□□□□ 0.33
CCT4-201ENST00000394440 PNMA6FA0A0J9YX94 578 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 MAP3K10Q02779 954 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 PPP1R18Q6NYC8 613 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 C4orf32Q8N8J7 132 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
CCT4-201ENST00000394440 CBX8Q9HC52 389 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
CCT4-201ENST00000394440 PPP1R11O60927 126 aaPredicted RBP17.07■□□□□ 0.32
CCT4-201ENST00000394440 GPR162Q16538 588 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 GMCL1Q96IK5 515 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 SBF1O95248 1867 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
CCT4-201ENST00000394440 USP49Q70CQ1 688 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 DPF2Q92785 391 aa17.07■□□□□ 0.32
CCT4-201ENST00000394440 F5H6K3 240 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 ZBTB5O15062 677 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 EGFRP00533 1210 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 SLC16A2P36021 539 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 SLC1A4P43007 532 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 ZNF165P49910 485 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 KLRC3Q07444 240 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 USP17L10C9JJH3 530 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 MCM7P33993 719 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 INF2Q27J81 1249 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
CCT4-201ENST00000394440 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms