RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 SLC39A14Q15043 492 aa15.35■□□□□ 0.05
SRSF5-201ENST00000394366 TSPY26PQ9H489 355 aa15.35■□□□□ 0.05
SRSF5-201ENST00000394366 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
SRSF5-201ENST00000394366 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
SRSF5-201ENST00000394366 MAD2L2Q9UI95 211 aa15.35■□□□□ 0.05
SRSF5-201ENST00000394366 UNCXA6NJT0 531 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 TTLL1O95922 423 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 PARP1P09874 1014 aaKnown RBP15.34■□□□□ 0.05
SRSF5-201ENST00000394366 CALML3P27482 149 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 SHMT1P34896 483 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 ANKRD13AQ8IZ07 590 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 SLC10A4Q96EP9 437 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
SRSF5-201ENST00000394366 GREB1LQ9C091 1923 aaPredicted RBP15.34■□□□□ 0.05
SRSF5-201ENST00000394366 BTBD18B2RXH4 712 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 CTAGE5O15320 804 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 FOXN1O15353 648 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 XRCC6P12956 609 aaKnown RBP eCLIP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 DCAF15Q66K64 600 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 GALNT17Q6IS24 598 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 METTL16Q86W50 562 aaKnown RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 ZSCAN29Q8IWY8 852 aaPredicted RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 CCDC148Q8NFR7 591 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 ANP32BQ92688 251 aaKnown RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 FTOQ9C0B1 505 aaKnown RBP eCLIP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 KCNJ14Q9UNX9 436 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 CLIC4Q9Y696 253 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 MORC2Q9Y6X9 1032 aaPredicted RBP15.33■□□□□ 0.04
SRSF5-201ENST00000394366 THSD7BQ9C0I4 1608 aa15.33■□□□□ 0.04
SRSF5-201ENST00000394366 BMP15O95972 392 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 AKR1B1P15121 316 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 LIG1P18858 919 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 FAM160A1Q05DH4 1040 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 CLSTN2Q9H4D0 955 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 VPS54Q9P1Q0 977 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 hCG_1984214I3L0E3 225 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 MAP3K9P80192 1104 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 MKRN3Q13064 507 aaKnown RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 MIGA2Q7L4E1 593 aa15.32■□□□□ 0.04
SRSF5-201ENST00000394366 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 ZNF713Q8N859 430 aaPredicted RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
SRSF5-201ENST00000394366 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 KLRF2D3W0D1 207 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 SPRYD7Q5W111 196 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 TATDN1Q6P1N9 297 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.046e-13■■■□□ 16
SRSF5-201ENST00000394366 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 HERC5Q9UII4 1024 aaKnown RBP15.31■□□□□ 0.04
SRSF5-201ENST00000394366 CSADQ9Y600 493 aa15.31■□□□□ 0.04
SRSF5-201ENST00000394366 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
SRSF5-201ENST00000394366 CA12O43570 354 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
SRSF5-201ENST00000394366 CCDC192P0DO97 292 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 CMA1P23946 247 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 NLRP5P59047 1200 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 PTPAQ15257 358 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
SRSF5-201ENST00000394366 RBM43Q6ZSC3 357 aaKnown RBP15.3■□□□□ 0.04
SRSF5-201ENST00000394366 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
SRSF5-201ENST00000394366 STAG2Q8N3U4 1231 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 KANSL2Q9H9L4 492 aa15.3■□□□□ 0.04
SRSF5-201ENST00000394366 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
SRSF5-201ENST00000394366 CUTAO60888 179 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 NR1I2O75469 434 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 PDHBP11177 359 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 GPATCH4Q5T3I0 446 aaKnown RBP15.29■□□□□ 0.04
SRSF5-201ENST00000394366 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 RRP36Q96EU6 259 aaKnown RBP15.29■□□□□ 0.04
SRSF5-201ENST00000394366 WNK4Q96J92 1243 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 NYAP2Q9P242 653 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 SEC63Q9UGP8 760 aaKnown RBP15.29■□□□□ 0.04
SRSF5-201ENST00000394366 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
SRSF5-201ENST00000394366 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
SRSF5-201ENST00000394366 NR5A1Q13285 461 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 VGLL4Q14135 290 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 DAGLBQ8NCG7 672 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 MKL1Q969V6 931 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 DNAJC18Q9H819 358 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 BARHL2Q9NY43 387 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms