RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 DNAI2Q9GZS0 605 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 SMTNP53814 917 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 MYCT1Q8N699 235 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 DCPSQ96C86 337 aaKnown RBP11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 PGBD1Q96JS3 809 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 PPP6R2O75170 966 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 BMP3P12645 472 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 TBC1D16Q8TBP0 767 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 CCPG1Q9ULG6 757 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 ZNF609O15014 1411 aa11.9□□□□□ -0.5
MTHFD2-201ENST00000394053 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.51
MTHFD2-201ENST00000394053 ECE2O60344 883 aa11.9□□□□□ -0.51
MTHFD2-201ENST00000394053 HARSP12081 509 aaKnown RBP11.9□□□□□ -0.51
MTHFD2-201ENST00000394053 NLRX1Q86UT6 975 aa11.9□□□□□ -0.51
MTHFD2-201ENST00000394053 SRRTQ9BXP5 876 aaKnown RBP11.9□□□□□ -0.51
MTHFD2-201ENST00000394053 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 A0A087WWV3 80 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 MCTP2Q6DN12 878 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 TMED8Q6PL24 325 aaPredicted RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 TBCKQ8TEA7 893 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 GH2P01242 217 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 KRT9P35527 623 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 LONP1P36776 959 aaKnown RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 IFI16Q16666 785 aaKnown RBP11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 SYT10Q6XYQ8 523 aa11.89□□□□□ -0.51
MTHFD2-201ENST00000394053 TACC1O75410 805 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 GCNT3O95395 438 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 HLTFQ14527 1009 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 ZNF277Q9NRM2 450 aaPredicted RBP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 FANCLQ9NW38 375 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 GINS2Q9Y248 185 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 CDC27P30260 824 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 MAP9Q49MG5 647 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 NEFHP12036 1026 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 ARHGEF16Q5VV41 709 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 GPBP1Q86WP2 473 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 PLA2G4DQ86XP0 818 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 UBXN2AP68543 259 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 ZNF569Q5MCW4 686 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 IFT74Q96LB3 600 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 TAF6LQ9Y6J9 622 aa11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 V9GYY5 206 aaPredicted RBP11.88□□□□□ -0.51
MTHFD2-201ENST00000394053 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 ANKRD35Q8N283 1001 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 KDM3AQ9Y4C1 1321 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 MIER3Q7Z3K6 550 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 SLFN12Q8IYM2 578 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 STAT2P52630 851 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 BIRC3Q13489 604 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 ZNF512BQ96KM6 892 aaPredicted RBP11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 ZDHHC9Q9Y397 364 aa11.87□□□□□ -0.51
MTHFD2-201ENST00000394053 EXOC3O60645 756 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 NT5C2P49902 561 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 GADL1Q6ZQY3 521 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 MCF2L2Q86YR7 1114 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 TRIML1Q8N9V2 468 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 FNBP1Q96RU3 617 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 AZI2Q9H6S1 392 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 CTNNA2P26232 953 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 DPCR1Q3MIW9 517 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 SUPT20HL1Q3ZLR7 823 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 TMEM179Q6ZVK1 233 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 SYNCQ9H7C4 482 aa11.86□□□□□ -0.51
MTHFD2-201ENST00000394053 SLC39A2Q9NP94 309 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms