RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 SLC1A4P43007 532 aa20.7■□□□□ 0.9
FAM3A-205ENST00000393572 LHX8Q68G74 356 aa20.7■□□□□ 0.9
FAM3A-205ENST00000393572 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
FAM3A-205ENST00000393572 NUP88Q99567 741 aaPredicted RBP20.7■□□□□ 0.9
FAM3A-205ENST00000393572 FBXO40Q9UH90 709 aa20.7■□□□□ 0.9
FAM3A-205ENST00000393572 DDX20Q9UHI6 824 aaKnown RBP20.7■□□□□ 0.9
FAM3A-205ENST00000393572 CEP290O15078 2479 aa20.7■□□□□ 0.9
FAM3A-205ENST00000393572 H0YGN5 161 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 COBLO75128 1261 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 STAT2P52630 851 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 SNRNP48Q6IEG0 339 aaKnown RBP20.69■□□□□ 0.9
FAM3A-205ENST00000393572 MSL3Q8N5Y2 521 aaKnown RBP20.69■□□□□ 0.9
FAM3A-205ENST00000393572 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 SLC38A10Q9HBR0 1119 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 TOMM22Q9NS69 142 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 TCP11L1Q9NUJ3 509 aa20.69■□□□□ 0.9
FAM3A-205ENST00000393572 COL11A1P12107 1806 aaPredicted RBP20.69■□□□□ 0.9
FAM3A-205ENST00000393572 CNGA1P29973 690 aa20.68■□□□□ 0.9
FAM3A-205ENST00000393572 CYP2C19P33261 490 aa20.68■□□□□ 0.9
FAM3A-205ENST00000393572 NOVP48745 357 aa20.68■□□□□ 0.9
FAM3A-205ENST00000393572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM3A-205ENST00000393572 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-205ENST00000393572 STAG1Q8WVM7 1258 aa20.68■□□□□ 0.9
FAM3A-205ENST00000393572 MAML3Q96JK9 1138 aa20.68■□□□□ 0.9
FAM3A-205ENST00000393572 SLC34A2O95436 690 aa20.67■□□□□ 0.9
FAM3A-205ENST00000393572 CYBAP13498 195 aa20.67■□□□□ 0.9
FAM3A-205ENST00000393572 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
FAM3A-205ENST00000393572 MFSD6Q6ZSS7 791 aa20.67■□□□□ 0.9
FAM3A-205ENST00000393572 CHST13Q8NET6 341 aa20.67■□□□□ 0.9
FAM3A-205ENST00000393572 DIS3LQ8TF46 1054 aaKnown RBP20.67■□□□□ 0.9
FAM3A-205ENST00000393572 ISY1Q9ULR0 285 aaKnown RBP20.67■□□□□ 0.9
FAM3A-205ENST00000393572 ZNFX1Q9P2E3 1918 aaKnown RBP20.66■□□□□ 0.9
FAM3A-205ENST00000393572 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 SEPT4O43236 478 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 IKQ13123 557 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-205ENST00000393572 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 HABP4Q5JVS0 413 aaKnown RBP20.66■□□□□ 0.9
FAM3A-205ENST00000393572 RCSD1Q6JBY9 416 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 CWC27Q6UX04 472 aaKnown RBP20.66■□□□□ 0.9
FAM3A-205ENST00000393572 ARRDC4Q8NCT1 418 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 DCAF4Q8WV16 495 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 DDX11Q96FC9 970 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 TTC14Q96N46 770 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 IL17RBQ9NRM6 502 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
FAM3A-205ENST00000393572 ZNF213O14771 459 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
FAM3A-205ENST00000393572 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-205ENST00000393572 ZNF792Q3KQV3 632 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 TKFCQ3LXA3 575 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
FAM3A-205ENST00000393572 CPXCR1Q8N123 301 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 TINF2Q9BSI4 451 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 DSCC1Q9BVC3 393 aa20.65■□□□□ 0.9
FAM3A-205ENST00000393572 COL6A1P12109 1028 aa20.64■□□□□ 0.89
FAM3A-205ENST00000393572 MCCP23508 829 aa20.64■□□□□ 0.89
FAM3A-205ENST00000393572 ESR2Q92731 530 aa20.64■□□□□ 0.89
FAM3A-205ENST00000393572 DNM1LO00429 736 aa20.63■□□□□ 0.89
FAM3A-205ENST00000393572 ZNF467Q7Z7K2 595 aaPredicted RBP20.63■□□□□ 0.89
FAM3A-205ENST00000393572 RAVER2Q9HCJ3 691 aaKnown RBP20.63■□□□□ 0.89
FAM3A-205ENST00000393572 INCENPQ9NQS7 918 aa20.63■□□□□ 0.89
FAM3A-205ENST00000393572 PNMA2Q9UL42 364 aa20.63■□□□□ 0.89
FAM3A-205ENST00000393572 CNPY2Q9Y2B0 182 aa20.63■□□□□ 0.89
FAM3A-205ENST00000393572 RAD50Q92878 1312 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 SYNGAP1Q96PV0 1343 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 PGK2P07205 417 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 HAND2P61296 217 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 IMMTQ16891 758 aaKnown RBP20.62■□□□□ 0.89
FAM3A-205ENST00000393572 TTC22Q5TAA0 569 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 TRPV1Q8NER1 839 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 RUFY2Q8WXA3 655 aa20.62■□□□□ 0.89
FAM3A-205ENST00000393572 COLQQ9Y215 455 aaPredicted RBP20.62■□□□□ 0.89
FAM3A-205ENST00000393572 KBTBD13C9JR72 458 aa20.61■□□□□ 0.89
FAM3A-205ENST00000393572 NMT2O60551 498 aa20.61■□□□□ 0.89
FAM3A-205ENST00000393572 IQCA1Q86XH1 822 aa20.61■□□□□ 0.89
FAM3A-205ENST00000393572 ACAD9Q9H845 621 aa20.61■□□□□ 0.89
FAM3A-205ENST00000393572 RIPK3Q9Y572 518 aa20.61■□□□□ 0.89
FAM3A-205ENST00000393572 PLXNA1Q9UIW2 1896 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 PFASO15067 1338 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 DNAJC25-GNG10A0A024R161 153 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 A0A1W2PPC1 479 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 RARBP10826 455 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 CCDC96Q2M329 555 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 MAMDC4Q6UXC1 1216 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 CHRDL2Q6WN34 429 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 DGKHQ86XP1 1220 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 TMEM47Q9BQJ4 181 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 TACC3Q9Y6A5 838 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 FRMPD3Q5JV73 1810 aa20.6■□□□□ 0.89
FAM3A-205ENST00000393572 AKR1A1P14550 325 aa20.59■□□□□ 0.89
FAM3A-205ENST00000393572 BTNL9Q6UXG8 535 aa20.59■□□□□ 0.89
FAM3A-205ENST00000393572 C7orf61Q8IZ16 206 aa20.59■□□□□ 0.89
FAM3A-205ENST00000393572 CNNM2Q9H8M5 875 aa20.59■□□□□ 0.89
FAM3A-205ENST00000393572 PDE4AP27815 886 aa20.58■□□□□ 0.89
FAM3A-205ENST00000393572 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.89
FAM3A-205ENST00000393572 KRT23Q9C075 422 aa20.58■□□□□ 0.89
FAM3A-205ENST00000393572 SENP6Q9GZR1 1112 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms