RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 ENDOUP21128 410 aaKnown RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 ITIH3Q06033 890 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 PSME1Q06323 249 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 VIPAS39Q9H9C1 493 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 TMED5Q9Y3A6 229 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 CUTAO60888 179 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 CSPG5O95196 566 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 PSMD7P51665 324 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 ZNF362Q5T0B9 420 aaPredicted RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 MSL1Q68DK7 614 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 HIBCHQ6NVY1 386 aaPredicted RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 DEPTORQ8TB45 409 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 TUBA8Q9NY65 449 aaPredicted RBP12.65□□□□□ -0.38
LAMB1-203ENST00000393560 SH3GLB1Q9Y371 365 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 PSMC4P43686 418 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 AMPHP49418 695 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 IGBP1P78318 339 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 KLC1Q07866 573 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 GPR162Q16538 588 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 WDR66Q8TBY9 1149 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 HTR3EA5X5Y0 456 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 F13A1P00488 732 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 BCRP11274 1271 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 NLRP6P59044 892 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
LAMB1-203ENST00000393560 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
LAMB1-203ENST00000393560 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 FGD4Q96M96 766 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 IMPACTQ9P2X3 320 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 CHMP2BQ9UQN3 213 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 ATP6V1DQ9Y5K8 247 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 TRIM64CA6NLI5 447 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 HSPA8P11142 646 aaKnown RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 XRCC4Q13426 336 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 SLC2A7Q6PXP3 512 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 PPP1R14BQ96C90 147 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 FTOQ9C0B1 505 aaKnown RBP eCLIP12.63□□□□□ -0.39
LAMB1-203ENST00000393560 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
LAMB1-203ENST00000393560 STX6O43752 255 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 CCDC166P0CW27 439 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 CRELD2Q6UXH1 353 aaPredicted RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 MAELQ96JY0 434 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 SH3GL2Q99962 352 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 SYT15Q9BQS2 421 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 TGFB3P10600 412 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 HALP42357 657 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 KIF11P52732 1056 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 CAMK2BQ13554 666 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 ATP6V0A1Q93050 837 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 MOV10L1Q9BXT6 1211 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
LAMB1-203ENST00000393560 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
LAMB1-203ENST00000393560 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 SCTRP47872 440 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 SLC44A4Q53GD3 710 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms