RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 C4orf50Q6ZRC1 276 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 GET4Q7L5D6 327 aaPredicted RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 PHC3Q8NDX5 983 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 TRAIPQ9BWF2 469 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 MRPS26Q9BYN8 205 aaKnown RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 CCSER2Q9H7U1 834 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 NDE1Q9NXR1 346 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 TAB2Q9NYJ8 693 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 DONSONQ9NYP3 566 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 SUCLA2Q9P2R7 463 aaPredicted RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 STX18Q9P2W9 335 aaKnown RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 ITM2BQ9Y287 266 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 ENC1O14682 589 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 EVI5O60447 810 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 PDE9AO76083 593 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 SUN1O94901 812 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 F13A1P00488 732 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 S100A9P06702 114 aaKnown RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 RXRAP19793 462 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 TNFAIP3P21580 790 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 NOSTRINQ8IVI9 506 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 TCP11L2Q8N4U5 519 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 PARD3BQ8TEW8 1205 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 NOC4LQ9BVI4 516 aaKnown RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 ING2Q9H160 280 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 ADNPQ9H2P0 1102 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 NOL6Q9H6R4 1146 aaKnown RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 MKNK2Q9HBH9 465 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 PYCARDQ9ULZ3 195 aa3.58□□□□□ -1.84
PHF3-202ENST00000393387 RPH3AQ9Y2J0 694 aaPredicted RBP3.58□□□□□ -1.84
PHF3-202ENST00000393387 PLEKHH1Q9ULM0 1364 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TNNC2P02585 160 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CALM1P0DP23 149 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CALM2P0DP24 149 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CALM3P0DP25 149 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KRT2P35908 639 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 METAP2P50579 478 aaKnown RBP eCLIP3.57□□□□□ -1.84
PHF3-202ENST00000393387 ASPHQ12797 758 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TAF5Q15542 800 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 BNIPLQ7Z465 357 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 GSPT2Q8IYD1 628 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 TRMT44Q8IYL2 757 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 WDR60Q8WVS4 1066 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CAPSLQ8WWF8 208 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CUL5Q93034 780 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 NCLNQ969V3 563 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 PHF21AQ96BD5 680 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 THAP11Q96EK4 314 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 DTNBP1Q96EV8 351 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 NOX5Q96PH1 765 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CBX8Q9HC52 389 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 SH2B1Q9NRF2 756 aaPredicted RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 INTS9Q9NV88 658 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 GABBR1Q9UBS5 961 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 GOLGA3Q08378 1498 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 PRDM1O75626 825 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 APOA1P02647 267 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 GPTP24298 496 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 MAP4P27816 1152 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 ELF1P32519 619 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ADCY8P40145 1251 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 PPP1R2P41236 205 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 SERPINB4P48594 390 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ARF5P84085 180 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KLC1Q07866 573 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 LLGL1Q15334 1064 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 SMAD1Q15797 465 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 PPP1R2P3Q6NXS1 205 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 NME9Q86XW9 330 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TAGAPQ8N103 731 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 DTX3LQ8TDB6 740 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ELAC2Q9BQ52 826 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 TINF2Q9BSI4 451 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 MLXIPLQ9NP71 852 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TRIM17Q9Y577 477 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 USP47Q96K76 1375 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 A0A087WZG4 1122 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KCNK3O14649 394 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 GADD45BO75293 160 aaPredicted RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 GUCY1B2O75343 617 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 PAX7P23759 505 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TMEM67Q5HYA8 995 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TJAP1Q5JTD0 557 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ERLEC1Q96DZ1 483 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ATP6V0A4Q9HBG4 840 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 ARHGEF3Q9NR81 526 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 HACD3Q9P035 362 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 TBC1D7Q9P0N9 293 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 EPS15L1Q9UBC2 864 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 DIS3Q9Y2L1 958 aaKnown RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 SNX5Q9Y5X3 404 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KIF27Q86VH2 1401 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 CCDC189A1A4V9 331 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 SPDYE16A6NNV3 312 aaPredicted RBP3.57□□□□□ -1.84
PHF3-202ENST00000393387 FHAD1B1AJZ9 1412 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 EXOC5O00471 708 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 NUP155O75694 1391 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KRT6AP02538 564 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 KRT6BP04259 564 aa3.57□□□□□ -1.84
PHF3-202ENST00000393387 GCFC2P16383 781 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms