RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 HOXA7P31268 230 aaPredicted RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 CAP2P40123 477 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 BACE1P56817 501 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 HERVK_113P62684 666 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 ERVK-24P63145 666 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 GPR142Q7Z601 462 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 SUCLG2Q96I99 432 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 CDK15Q96Q40 435 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 UHRF1Q96T88 793 aaPredicted RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 P2RX7Q99572 595 aaKnown RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 BICC1Q9H694 974 aaKnown RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 THEGQ9P2T0 379 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.86
CASP4-201ENST00000393150 TACC3Q9Y6A5 838 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 ALPK3Q96L96 1907 aa9.71□□□□□ -0.86
CASP4-201ENST00000393150 DDTLA6NHG4 134 aaPredicted RBP9.7□□□□□ -0.86
CASP4-201ENST00000393150 USP17L10C9JJH3 530 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 EYA2O00167 538 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 VAMP4O75379 141 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 BTDP43251 543 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 DDX10Q13206 875 aaKnown RBP9.7□□□□□ -0.86
CASP4-201ENST00000393150 AAK1Q2M2I8 961 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 CCDC129Q6ZRS4 1044 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 DPP9Q86TI2 863 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 CRACR2BQ8N4Y2 399 aaPredicted RBP9.7□□□□□ -0.86
CASP4-201ENST00000393150 EHBP1Q8NDI1 1231 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 BADQ92934 168 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
CASP4-201ENST00000393150 GINM1Q9NU53 330 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 PI4KBQ9UBF8 816 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
CASP4-201ENST00000393150 CACNA1FO60840 1977 aa9.7□□□□□ -0.86
CASP4-201ENST00000393150 UTYO14607 1347 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 NCOR1O75376 2440 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 SLC15A5A6NIM6 579 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 WNT7AO00755 349 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 RAG1P15918 1043 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 FGFR2P21802 821 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 GRM5P41594 1212 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 NCOA4Q13772 614 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 ATP2B3Q16720 1220 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 MAP7D1Q3KQU3 841 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 SLC39A5Q6ZMH5 540 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 VGLL2Q8N8G2 317 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 ASB2Q96Q27 587 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 WDR18Q9BV38 432 aa9.69□□□□□ -0.86
CASP4-201ENST00000393150 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
CASP4-201ENST00000393150 TTYH1Q9H313 450 aaPredicted RBP9.69□□□□□ -0.86
CASP4-201ENST00000393150 BAG3O95817 575 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 NBPF7P0C2Y1 421 aaPredicted RBP9.68□□□□□ -0.86
CASP4-201ENST00000393150 RABL6Q3YEC7 729 aaPredicted RBP9.68□□□□□ -0.86
CASP4-201ENST00000393150 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
CASP4-201ENST00000393150 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
CASP4-201ENST00000393150 TIFAQ96CG3 184 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 FEZ1Q99689 392 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 ZNF576Q9H609 170 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 RABGAP1Q9Y3P9 1069 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 GAKO14976 1311 aa9.68□□□□□ -0.86
CASP4-201ENST00000393150 COL2A1P02458 1487 aaPredicted RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 ATRNL1Q5VV63 1379 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 ATG7O95352 703 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 USP14P54578 494 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 FPGSQ05932 587 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 EXOSC9Q06265 439 aaKnown RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 GRIN2CQ14957 1233 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 CCL14Q16627 93 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 AKNAD1Q5T1N1 836 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 GJC2Q5T442 439 aaPredicted RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 VASH1Q7L8A9 365 aaPredicted RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 IRX2Q9BZI1 471 aaPredicted RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 MTIF3Q9H2K0 278 aaKnown RBP9.67□□□□□ -0.86
CASP4-201ENST00000393150 VRTNQ9H8Y1 702 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 MSRAQ9UJ68 235 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 FANCIQ9NVI1 1328 aa9.67□□□□□ -0.86
CASP4-201ENST00000393150 GPR75-ASB3A0A0A6YYF3 556 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 DCDC2CA8MYV0 355 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 STRNO43815 780 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 LZTS3O60299 673 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms