RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 MYH1P12882 1939 aa16.23■□□□□ 0.19
MKS1-203ENST00000393120 GTPBP6O43824 516 aaPredicted RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 TXLNAP40222 546 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 CUL4BQ13620 913 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
MKS1-203ENST00000393120 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
MKS1-203ENST00000393120 PDHBP11177 359 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
MKS1-203ENST00000393120 NAPAP54920 295 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 PICALMQ13492 652 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 RASGRP4Q8TDF6 673 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 EHD4Q9H223 541 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
MKS1-203ENST00000393120 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
MKS1-203ENST00000393120 SMCO2A6NFE2 343 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 G3V3G9 751 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 TNNT1P13805 278 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
MKS1-203ENST00000393120 INF2Q27J81 1249 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 TMX1Q9H3N1 280 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 INTS13Q9NVM9 706 aa16.21■□□□□ 0.19
MKS1-203ENST00000393120 PPP1R3GB7ZBB8 358 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
MKS1-203ENST00000393120 TTLL1O95922 423 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 MYL1P05976 194 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 AKR1B1P15121 316 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 NONOQ15233 471 aaKnown RBP eCLIP16.2■□□□□ 0.18
MKS1-203ENST00000393120 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 AK8Q96MA6 479 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 C16orf45Q96MC5 204 aaPredicted RBP16.2■□□□□ 0.18
MKS1-203ENST00000393120 MTRQ99707 1265 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
MKS1-203ENST00000393120 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
MKS1-203ENST00000393120 TBX2Q13207 712 aaPredicted RBP16.19■□□□□ 0.18
MKS1-203ENST00000393120 STRIP1Q5VSL9 837 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 CCDC17Q96LX7 622 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 RMND1Q9NWS8 449 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 KIF2AO00139 706 aaPredicted RBP16.19■□□□□ 0.18
MKS1-203ENST00000393120 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
MKS1-203ENST00000393120 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 CD44P16070 742 aaKnown RBP16.19■□□□□ 0.18
MKS1-203ENST00000393120 SHMT1P34896 483 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 NR1I3Q14994 352 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 C2CD5Q86YS7 1000 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 PIGSQ96S52 555 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 MXD3Q9BW11 206 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 TMEM60Q9H2L4 133 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 DISC1Q9NRI5 854 aa16.19■□□□□ 0.18
MKS1-203ENST00000393120 TUBB4AP04350 444 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 CRKP46108 304 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 SCNN1DP51172 638 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 CDKAL1Q5VV42 579 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 E4F1Q66K89 784 aaPredicted RBP16.18■□□□□ 0.18
MKS1-203ENST00000393120 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
MKS1-203ENST00000393120 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.188e-7■■■□□ 15.6
MKS1-203ENST00000393120 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
MKS1-203ENST00000393120 SAMSN1Q9NSI8 373 aaKnown RBP16.18■□□□□ 0.18
MKS1-203ENST00000393120 COL11A2P13942 1736 aaPredicted RBP16.18■□□□□ 0.18
MKS1-203ENST00000393120 A0A1B0GTH6 734 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 USP27XA6NNY8 438 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 H0YIN7 160 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
MKS1-203ENST00000393120 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
MKS1-203ENST00000393120 CASP1P29466 404 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 NEK8Q86SG6 692 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
MKS1-203ENST00000393120 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 CCP110O43303 1012 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 UBA7P41226 1012 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 STAT6P42226 847 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 ZNF543Q08ER8 600 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
MKS1-203ENST00000393120 SPECC1LQ69YQ0 1117 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms