RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 XDHP47989 1333 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 JCADQ9P266 1359 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 KCNJ18B7U540 433 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 OAS2P29728 719 aaKnown RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 ARID5AQ03989 594 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 KCNJ12Q14500 433 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 FBXO38Q6PIJ6 1188 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 BPIFA3Q9BQP9 254 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
CALD1-203ENST00000393118 LMO7Q8WWI1 1683 aa11.81□□□□□ -0.52
CALD1-203ENST00000393118 SOWAHDA6NJG2 315 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 RBL2Q08999 1139 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TCERG1LQ5VWI1 586 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 E4F1Q66K89 784 aaPredicted RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 FAM114A1Q8IWE2 563 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 LRWD1Q9UFC0 647 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 PP2D1A8MPX8 630 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 ANKRD65E5RJM6 399 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TEX33O43247 280 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 CUL4BQ13620 913 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 CNPY4Q8N129 248 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 EFCC1Q9HA90 598 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 GDAQ9Y2T3 454 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
CALD1-203ENST00000393118 PCDHA4Q9UN74 947 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 CTAGE15A4D2H0 777 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TRIM66O15016 1216 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 CTAGE8P0CG41 777 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 NFIXQ14938 502 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
CALD1-203ENST00000393118 SV2BQ7L1I2 683 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 CTAGE6Q86UF2 777 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 CTAGE4Q8IX94 777 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 TUBE1Q9UJT0 475 aa11.8□□□□□ -0.52
CALD1-203ENST00000393118 MYO1CO00159 1063 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 MYO1BO43795 1136 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 STX10O60499 249 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 SERPINB2P05120 415 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 RUFY1Q96T51 708 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
CALD1-203ENST00000393118 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 MACROD2A1Z1Q3 448 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 KIAA0754O94854 1291 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 IVLP07476 585 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 SNX29Q8TEQ0 813 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 RGPD5Q99666 1765 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 CYLC1P35663 651 aaPredicted RBP11.79□□□□□ -0.52
CALD1-203ENST00000393118 GRAPQ13588 217 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
CALD1-203ENST00000393118 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 JRKLQ9Y4A0 524 aa11.79□□□□□ -0.52
CALD1-203ENST00000393118 USO1O60763 962 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 GYS2P54840 703 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 CALCRLQ16602 461 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 ICE2Q659A1 982 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 COA7Q96BR5 231 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 PIGSQ96S52 555 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 BICDL2A1A5D9 508 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 TOGARAM2Q6ZUX3 1019 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 LONP1P36776 959 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 ADCY7P51828 1080 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
CALD1-203ENST00000393118 EVX2Q03828 476 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 TROAPQ12815 778 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
CALD1-203ENST00000393118 TRAPPC10P48553 1259 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 NEK8Q86SG6 692 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 SEPT11Q9NVA2 429 aaKnown RBP11.77□□□□□ -0.52
CALD1-203ENST00000393118 RRP15Q9Y3B9 282 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms