RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PCDHA8Q9Y5H6 950 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 GNA11P29992 359 aa22.87■■□□□ 1.25
PTPN11-202ENST00000392597 RBM5P52756 815 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPN11-202ENST00000392597 PYM1Q9BRP8 204 aaKnown RBP22.87■■□□□ 1.25
PTPN11-202ENST00000392597 FAM198AQ9UFP1 575 aa22.87■■□□□ 1.25
PTPN11-202ENST00000392597 SERTAD1Q9UHV2 236 aa22.87■■□□□ 1.25
PTPN11-202ENST00000392597 PCDHA5Q9Y5H7 936 aa22.87■■□□□ 1.25
PTPN11-202ENST00000392597 ESYT2A0FGR8 921 aa22.86■■□□□ 1.25
PTPN11-202ENST00000392597 ADAMTS3O15072 1205 aa22.86■■□□□ 1.25
PTPN11-202ENST00000392597 TPM4P67936 248 aa22.86■■□□□ 1.25
PTPN11-202ENST00000392597 RASGRP2Q7LDG7 609 aa22.86■■□□□ 1.25
PTPN11-202ENST00000392597 CLIP2Q9UDT6 1046 aa22.86■■□□□ 1.25
PTPN11-202ENST00000392597 COL2A1P02458 1487 aaPredicted RBP22.86■■□□□ 1.25
PTPN11-202ENST00000392597 NAPAP54920 295 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 USP49Q70CQ1 688 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 FOXP4Q8IVH2 680 aaPredicted RBP22.85■■□□□ 1.25
PTPN11-202ENST00000392597 TRIML1Q8N9V2 468 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 SYMPKQ92797 1274 aaKnown RBP22.85■■□□□ 1.25
PTPN11-202ENST00000392597 C6orf50Q9HD87 102 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 MYH4Q9Y623 1939 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 SLFN14P0C7P3 912 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 YBX3P16989 372 aaKnown RBP eCLIP22.85■■□□□ 1.258e-7■■□□□ 11.6
PTPN11-202ENST00000392597 MCM7P33993 719 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 ZFPM1Q8IX07 1006 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 SPC24Q8NBT2 197 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 VPS33BQ9H267 617 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 TAOK3Q9H2K8 898 aa22.85■■□□□ 1.25
PTPN11-202ENST00000392597 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 YDJCA8MPS7 323 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 SARSP49591 514 aaKnown RBP22.84■■□□□ 1.25
PTPN11-202ENST00000392597 KRT25Q7Z3Z0 450 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 LRRC47Q8N1G4 583 aaKnown RBP22.84■■□□□ 1.25
PTPN11-202ENST00000392597 C4orf32Q8N8J7 132 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 SPATA20Q8TB22 786 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 EPSTI1Q96J88 318 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 DNAJC18Q9H819 358 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 ATRNL1Q5VV63 1379 aa22.84■■□□□ 1.25
PTPN11-202ENST00000392597 VWA3AA6NCI4 1184 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 LAD1O00515 517 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 ENTPD3O75355 529 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 LONP1P36776 959 aaKnown RBP22.83■■□□□ 1.25
PTPN11-202ENST00000392597 ZNF543Q08ER8 600 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 GPATCH4Q5T3I0 446 aaKnown RBP22.83■■□□□ 1.25
PTPN11-202ENST00000392597 PIGSQ96S52 555 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 CPVLQ9H3G5 476 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 PCDHAC2Q9Y5I4 1007 aa22.83■■□□□ 1.25
PTPN11-202ENST00000392597 NFKBIEO00221 500 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 NCAPHQ15003 741 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 DRC7Q8IY82 874 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 PDILTQ8N807 584 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 RASGRP4Q8TDF6 673 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 SMARCE1Q969G3 411 aa22.83■■□□□ 1.24
PTPN11-202ENST00000392597 TTC12Q9H892 705 aaPredicted RBP22.83■■□□□ 1.24
PTPN11-202ENST00000392597 SMCO2A6NFE2 343 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 DDTLA6NHG4 134 aaPredicted RBP22.82■■□□□ 1.24
PTPN11-202ENST00000392597 MYO1BO43795 1136 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 TCP10Q12799 353 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 TATDN1Q6P1N9 297 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 SH3RF1Q7Z6J0 888 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 HOMER1Q86YM7 354 aa22.82■■□□□ 1.24
PTPN11-202ENST00000392597 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 FOXN1O15353 648 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 SMC2O95347 1197 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 CACNB3P54284 484 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 EIF6P56537 245 aaKnown RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 PPP1R18Q6NYC8 613 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 SH3BP5LQ7L8J4 393 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 MKL1Q969V6 931 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 UBA5Q9GZZ9 404 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 NYAP2Q9P242 653 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 DACH1Q9UI36 760 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 MAN1B1Q9UKM7 699 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 FRMPD2Q68DX3 1309 aaPredicted RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 A0A087X0B3 334 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 MYL5Q02045 173 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 ORC2Q13416 577 aaPredicted RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 GPR162Q16538 588 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 CERKLQ49MI3 558 aaPredicted RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 MLKLQ8NB16 471 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 DHX58Q96C10 678 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 ZNF830Q96NB3 372 aaPredicted RBP22.81■■□□□ 1.24
PTPN11-202ENST00000392597 TRIM34Q9BYJ4 488 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 KANSL2Q9H9L4 492 aa22.81■■□□□ 1.24
PTPN11-202ENST00000392597 PRPHP41219 470 aa22.8■■□□□ 1.24
PTPN11-202ENST00000392597 MORC3Q14149 939 aa22.8■■□□□ 1.24
PTPN11-202ENST00000392597 NONOQ15233 471 aaKnown RBP eCLIP22.8■■□□□ 1.24
PTPN11-202ENST00000392597 INF2Q27J81 1249 aa22.8■■□□□ 1.24
PTPN11-202ENST00000392597 RSBN1LQ6PCB5 846 aaPredicted RBP22.8■■□□□ 1.24
PTPN11-202ENST00000392597 CLEC10AQ8IUN9 316 aa22.8■■□□□ 1.24
PTPN11-202ENST00000392597 ZSCAN29Q8IWY8 852 aaPredicted RBP22.8■■□□□ 1.24
PTPN11-202ENST00000392597 VAT1LQ9HCJ6 419 aa22.8■■□□□ 1.24
PTPN11-202ENST00000392597 OFD1O75665 1012 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 PRR29P0C7W0 189 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 IL17AQ16552 155 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 CT47A1Q5JQC4 288 aaPredicted RBP22.79■■□□□ 1.24
PTPN11-202ENST00000392597 IQUBQ8NA54 791 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 KCNF1Q9H3M0 494 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 PNMA6FA0A0J9YX94 578 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms