RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ASPRV1Q53RT3 343 aa21.73■■□□□ 1.07
ERCC2-203ENST00000391944 PYM1Q9BRP8 204 aaKnown RBP21.73■■□□□ 1.07
ERCC2-203ENST00000391944 STK32BQ9NY57 414 aa21.73■■□□□ 1.07
ERCC2-203ENST00000391944 IMPACTQ9P2X3 320 aa21.73■■□□□ 1.07
ERCC2-203ENST00000391944 TTLL1O95922 423 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 LONP1P36776 959 aaKnown RBP21.72■■□□□ 1.07
ERCC2-203ENST00000391944 EN1Q05925 392 aaPredicted RBP21.72■■□□□ 1.07
ERCC2-203ENST00000391944 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 HOMER1Q86YM7 354 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 ZNF219Q9P2Y4 722 aaPredicted RBP21.72■■□□□ 1.07
ERCC2-203ENST00000391944 GNA11P29992 359 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 FILIP1Q7Z7B0 1213 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 IQUBQ8NA54 791 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 PIGSQ96S52 555 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 UBA5Q9GZZ9 404 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 VAT1LQ9HCJ6 419 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 C6orf50Q9HD87 102 aa21.72■■□□□ 1.07
ERCC2-203ENST00000391944 ZNF646O15015 1829 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-203ENST00000391944 ATP1A3P13637 1013 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 E2F4Q16254 413 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 INF2Q27J81 1249 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 LRRC47Q8N1G4 583 aaKnown RBP21.71■■□□□ 1.07
ERCC2-203ENST00000391944 RGS17Q9UGC6 210 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-203ENST00000391944 SMCO2A6NFE2 343 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 AFMP43652 599 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 CC2D2BQ6DHV5 1058 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 ZFPM1Q8IX07 1006 aa21.71■■□□□ 1.07
ERCC2-203ENST00000391944 hCG_1984214I3L0E3 225 aa21.7■■□□□ 1.06
ERCC2-203ENST00000391944 GSDMDP57764 484 aa21.7■■□□□ 1.06
ERCC2-203ENST00000391944 DNTTIP2Q5QJE6 756 aaKnown RBP21.7■■□□□ 1.06
ERCC2-203ENST00000391944 KRT25Q7Z3Z0 450 aa21.7■■□□□ 1.06
ERCC2-203ENST00000391944 ZNF713Q8N859 430 aaPredicted RBP21.7■■□□□ 1.06
ERCC2-203ENST00000391944 IDI2Q9BXS1 227 aa21.7■■□□□ 1.06
ERCC2-203ENST00000391944 DHX36Q9H2U1 1008 aaKnown RBP21.7■■□□□ 1.06
ERCC2-203ENST00000391944 FANCLQ9NW38 375 aa21.7■■□□□ 1.06
ERCC2-203ENST00000391944 EIF6P56537 245 aaKnown RBP21.69■■□□□ 1.06
ERCC2-203ENST00000391944 DPYDQ12882 1025 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 ARID5BQ14865 1188 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 CT47A1Q5JQC4 288 aaPredicted RBP21.69■■□□□ 1.06
ERCC2-203ENST00000391944 SOGA3Q5TF21 947 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 ENOX1Q8TC92 643 aaKnown RBP21.69■■□□□ 1.06
ERCC2-203ENST00000391944 CCDC17Q96LX7 622 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 GSDMAQ96QA5 445 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 SERPINA10Q9UK55 444 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 FRMPD2Q68DX3 1309 aaPredicted RBP21.69■■□□□ 1.06
ERCC2-203ENST00000391944 GREB1LQ9C091 1923 aaPredicted RBP21.69■■□□□ 1.06
ERCC2-203ENST00000391944 ESYT2A0FGR8 921 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 LAD1O00515 517 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 AOC3Q16853 763 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 CLEC10AQ8IUN9 316 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 PCDHAC2Q9Y5I4 1007 aa21.69■■□□□ 1.06
ERCC2-203ENST00000391944 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
ERCC2-203ENST00000391944 POTEAQ6S8J7 498 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 DTHD1Q6ZMT9 781 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 ERCC5P28715 1186 aaPredicted RBP21.68■■□□□ 1.06
ERCC2-203ENST00000391944 RBM5P52756 815 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■□□□□ 11
ERCC2-203ENST00000391944 PPP4R3BQ5MIZ7 849 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 PDXDC2PQ6P474 469 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 TMEM60Q9H2L4 133 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 FAM198AQ9UFP1 575 aa21.68■■□□□ 1.06
ERCC2-203ENST00000391944 CBFA2T2O43439 604 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 UBASH3AP57075 661 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 FMR1Q06787 632 aaKnown RBP eCLIP21.67■■□□□ 1.063e-6■■□□□ 13.5
ERCC2-203ENST00000391944 ZNF543Q08ER8 600 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 NONOQ15233 471 aaKnown RBP eCLIP21.67■■□□□ 1.062e-13■■■□□ 17.5
ERCC2-203ENST00000391944 SUPT20HQ8NEM7 779 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 SERPINC1P01008 464 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 TPM2P07951 284 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 TXLNAP40222 546 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 PRPHP41219 470 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 CACNB3P54284 484 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 DNAJC18Q9H819 358 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 PI4KBQ9UBF8 816 aa21.67■■□□□ 1.06
ERCC2-203ENST00000391944 MPHOSPH10O00566 681 aaKnown RBP21.66■■□□□ 1.06
ERCC2-203ENST00000391944 TCP10Q12799 353 aa21.66■■□□□ 1.06
ERCC2-203ENST00000391944 TMC6Q7Z403 805 aa21.66■■□□□ 1.06
ERCC2-203ENST00000391944 GPCPD1Q9NPB8 672 aa21.66■■□□□ 1.06
ERCC2-203ENST00000391944 CASP1P29466 404 aa21.66■■□□□ 1.06
ERCC2-203ENST00000391944 DHX8Q14562 1220 aaKnown RBP21.66■■□□□ 1.06
ERCC2-203ENST00000391944 NFE2L3Q9Y4A8 694 aa21.66■■□□□ 1.06
ERCC2-203ENST00000391944 SIPA1L1O43166 1804 aa21.65■■□□□ 1.06
ERCC2-203ENST00000391944 MYH4Q9Y623 1939 aa21.65■■□□□ 1.06
ERCC2-203ENST00000391944 DDTLA6NHG4 134 aaPredicted RBP21.65■■□□□ 1.06
ERCC2-203ENST00000391944 GPATCH4Q5T3I0 446 aaKnown RBP21.65■■□□□ 1.06
ERCC2-203ENST00000391944 DPF2Q92785 391 aa21.65■■□□□ 1.06
ERCC2-203ENST00000391944 MED15Q96RN5 788 aa21.65■■□□□ 1.06
ERCC2-203ENST00000391944 SLURP2P0DP57 97 aa21.64■■□□□ 1.06
ERCC2-203ENST00000391944 SKILP12757 684 aa21.64■■□□□ 1.06
ERCC2-203ENST00000391944 ZNF18P17022 549 aa21.64■■□□□ 1.06
ERCC2-203ENST00000391944 CCZ1BP86790 482 aa21.64■■□□□ 1.06
ERCC2-203ENST00000391944 CCZ1P86791 482 aaPredicted RBP21.64■■□□□ 1.06
ERCC2-203ENST00000391944 REXO1Q8N1G1 1221 aaKnown RBP21.64■■□□□ 1.06
ERCC2-203ENST00000391944 MTRQ99707 1265 aa21.64■■□□□ 1.06
ERCC2-203ENST00000391944 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.05
ERCC2-203ENST00000391944 NEK8Q86SG6 692 aa21.64■■□□□ 1.05
ERCC2-203ENST00000391944 JMJD4Q9H9V9 463 aa21.64■■□□□ 1.05
ERCC2-203ENST00000391944 PNMA6FA0A0J9YX94 578 aa21.63■■□□□ 1.05
ERCC2-203ENST00000391944 GTPBP6O43824 516 aaPredicted RBP21.63■■□□□ 1.05
ERCC2-203ENST00000391944 CDC25AP30304 524 aa21.63■■□□□ 1.05
ERCC2-203ENST00000391944 ORC2Q13416 577 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms