RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 ASTN2O75129 1339 aaPredicted RBP11.32□□□□□ -0.6
TRBV11-1-201ENST00000390367 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 SMCO2A6NFE2 343 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 USP17L10C9JJH3 530 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 CYTH3O43739 400 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 SLURP2P0DP57 97 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 ARMC9Q7Z3E5 817 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 SIAH1Q8IUQ4 282 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 LEO1Q8WVC0 666 aaPredicted RBP11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 JMJD4Q9H9V9 463 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 TMOD4Q9NZQ9 345 aa11.31□□□□□ -0.6
TRBV11-1-201ENST00000390367 STXBP3O00186 592 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 SPTLC2O15270 562 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 VEGFAP15692 232 aaPredicted RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 ME1P48163 572 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 ADCY7P51828 1080 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 CEBPZQ03701 1054 aaKnown RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 CUL5Q93034 780 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 USP28Q96RU2 1077 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 ZMYND12Q9H0C1 365 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 GREB1LQ9C091 1923 aaPredicted RBP11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
TRBV11-1-201ENST00000390367 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 UNCXA6NJT0 531 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 KIF28PB7ZC32 967 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 PPP6R2O75170 966 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 SLC16A2P36021 539 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 ECE1P42892 770 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 CCDC73Q6ZRK6 1079 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 ANKRD13AQ8IZ07 590 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 MTMR8Q96EF0 704 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
TRBV11-1-201ENST00000390367 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 PTPRAP18433 802 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 INPP5BP32019 993 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 BACE1P56817 501 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 JAG1P78504 1218 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 SPP2Q13103 211 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 NR5A1Q13285 461 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 ORC2Q13416 577 aaPredicted RBP11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 SLC39A14Q15043 492 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 MYH6P13533 1939 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 SCN4AP35499 1836 aa11.28□□□□□ -0.6
TRBV11-1-201ENST00000390367 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 ZBED4O75132 1171 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 SHROOM1Q2M3G4 852 aaPredicted RBP11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRBV11-1-201ENST00000390367 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms