RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 FGRP09769 529 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 CALM1P0DP23 149 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 CALM2P0DP24 149 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 CALM3P0DP25 149 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 VPS16Q9H269 839 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 KAT14Q9H8E8 782 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 GDAQ9Y2T3 454 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 PPP2R5BQ15173 497 aa13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 SPATA1Q5VX52 437 aa13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 FERMT2Q96AC1 680 aa13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 STX8Q9UNK0 236 aa13.21□□□□□ -0.3
RAPGEF3-201ENST00000389212 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 ZSCAN12O43309 604 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 ST5P78524 1137 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 RASSF8Q8NHQ8 419 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 ORC4O43929 436 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 ERCC5P28715 1186 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 CLCN6P51797 869 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 SLC35G1Q2M3R5 365 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 RAD9BQ6WBX8 426 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 UBXN4Q92575 508 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-201ENST00000389212 PHLPP2Q6ZVD8 1323 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 AKR1B15C9JRZ8 316 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 CASP14P31944 242 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCP110O43303 1012 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 TFRCP02786 760 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 LEKR1Q6ZMV7 388 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 PPFIBP1Q86W92 1011 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 ARPP21Q9UBL0 812 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 ADD3Q9UEY8 706 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 TRIM49BA6NDI0 452 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 STX10O60499 249 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 TM4SF1P30408 202 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 MAP2K1Q02750 393 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 INF2Q27J81 1249 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 BLIDQ8IZY5 108 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 TMEM60Q9H2L4 133 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
RAPGEF3-201ENST00000389212 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 MYO1BO43795 1136 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 ABL1P00519 1130 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 LDHBP07195 334 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 PDXDC2PQ6P474 469 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 LAMB2P55268 1798 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
RAPGEF3-201ENST00000389212 N4BP3O15049 544 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 CYTH3O43739 400 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 KRT31Q15323 416 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 ACRBPQ8NEB7 543 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 SEMA3EO15041 775 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 TADA3O75528 432 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 NELFBQ8WX92 580 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 SLC24A3Q9HC58 644 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 GYPCP04921 128 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 KIF5BP33176 963 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 STAT6P42226 847 aa13.17□□□□□ -0.3
RAPGEF3-201ENST00000389212 PIK3R5Q8WYR1 880 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms