RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SPAG1Q07617 926 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
SCFD2-201ENST00000388940 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
SCFD2-201ENST00000388940 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
SCFD2-201ENST00000388940 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
SCFD2-201ENST00000388940 MYL1P05976 194 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 PRPHP41219 470 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 ELF2Q15723 593 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 DTHD1Q6ZMT9 781 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 SLC51AQ86UW1 340 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 STAMQ92783 540 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 CCSER1Q9C0I3 900 aa16.91■□□□□ 0.3
SCFD2-201ENST00000388940 CDK8P49336 464 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 CCDC51Q96ER9 411 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
SCFD2-201ENST00000388940 DISC1Q9NRI5 854 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 DDX41Q9UJV9 622 aaKnown RBP16.9■□□□□ 0.3
SCFD2-201ENST00000388940 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 BBOX1O75936 387 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 UFL1O94874 794 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 FECHP22830 423 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 STAT6P42226 847 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 NOVP48745 357 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 CBX1P83916 185 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 PAK1Q13153 545 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 ZMYND12Q9H0C1 365 aa16.9■□□□□ 0.3
SCFD2-201ENST00000388940 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 FANCGO15287 622 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 ST5P78524 1137 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 RBL2Q08999 1139 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 KCNB1Q14721 858 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 GPR101Q96P66 508 aaPredicted RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 EYA3Q99504 573 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 SAP30BPQ9UHR5 308 aaKnown RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 STX8Q9UNK0 236 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 GAKO14976 1311 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 UBAP1LF5GYI3 381 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 TBC1D22AQ8WUA7 517 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
SCFD2-201ENST00000388940 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
SCFD2-201ENST00000388940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
SCFD2-201ENST00000388940 MFAP3LO75121 409 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 GYS1P13807 737 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
SCFD2-201ENST00000388940 RHBDL3P58872 404 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
SCFD2-201ENST00000388940 KRT31Q15323 416 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 NAALADL2Q58DX5 795 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 NELFBQ8WX92 580 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 TMEM60Q9H2L4 133 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 FLT1P17948 1338 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 H7C1D1 291 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 SERPINB2P05120 415 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 CCDC175P0C221 793 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 H2AFXP16104 143 aaPredicted RBP16.88■□□□□ 0.29
SCFD2-201ENST00000388940 INF2Q27J81 1249 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 FBXO38Q6PIJ6 1188 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 KRT25Q7Z3Z0 450 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
SCFD2-201ENST00000388940 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 PARP1P09874 1014 aaKnown RBP16.87■□□□□ 0.29
SCFD2-201ENST00000388940 CASQ1P31415 396 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 ERCC6LQ2NKX8 1250 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 AK8Q96MA6 479 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 KBTBD4Q9NVX7 518 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
SCFD2-201ENST00000388940 URI1O94763 535 aaPredicted RBP16.86■□□□□ 0.29
SCFD2-201ENST00000388940 GNA11P29992 359 aa16.86■□□□□ 0.29
SCFD2-201ENST00000388940 UBA7P41226 1012 aa16.86■□□□□ 0.29
SCFD2-201ENST00000388940 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
SCFD2-201ENST00000388940 MAP3K9P80192 1104 aa16.86■□□□□ 0.29
SCFD2-201ENST00000388940 ORC2Q13416 577 aaPredicted RBP16.86■□□□□ 0.29
SCFD2-201ENST00000388940 TRIM14Q14142 442 aa16.86■□□□□ 0.29
SCFD2-201ENST00000388940 TCP11X2Q5H9J9 407 aa16.86■□□□□ 0.29
SCFD2-201ENST00000388940 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms