RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZNF200P98182 395 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 FMR1Q06787 632 aaKnown RBP eCLIP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 LAPTM5Q13571 262 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 HSF5Q4G112 596 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 ZFYVE27Q5T4F4 411 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 MEI1Q5TIA1 1274 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 GALNT18Q6P9A2 607 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 ZC3H14Q6PJT7 736 aaKnown RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 BNC2Q6ZN30 1099 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 TMC3Q7Z5M5 1100 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SLFN12Q8IYM2 578 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 ZNF655Q8N720 491 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 DAGLBQ8NCG7 672 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SLC16A11Q8NCK7 471 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 LINC00116Q8NCU8 138 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 NUP43Q8NFH3 380 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SYTL5Q8TDW5 730 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 ZNF526Q8TF50 670 aaPredicted RBP1.18□□□□□ -2.22
SNORD28-201ENST00000384706 CRELD1Q96HD1 420 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SPATA25Q9BR10 227 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 CDADC1Q9BWV3 514 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 ASPNQ9BXN1 380 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 HDAC8Q9BY41 377 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SMPD4Q9NXE4 827 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 TNFRSF10DQ9UBN6 386 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 REV1Q9UBZ9 1251 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 SUSD2Q9UGT4 822 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 MINPP1Q9UNW1 487 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 PCDHA5Q9Y5H7 936 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 TAF6LQ9Y6J9 622 aa1.18□□□□□ -2.22
SNORD28-201ENST00000384706 A0A1W2PQ45 241 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 A0A1W2PQJ5 194 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 A0A1W2PQY0 241 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FAM221AA4D161 298 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 MINDY4BA8MYZ0 360 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 DNAJA2O60884 412 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 HTR3BO95264 441 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 PRAMEF1O95521 474 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 F13A1P00488 732 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 PF4P02776 101 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 RLBP1P12271 317 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 RAG1P15918 1043 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 TNFRSF1AP19438 455 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 KRTAP5-9P26371 169 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 GNA15P30679 374 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 CNR2P34972 360 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 HMGA2P52926 109 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FOXO4P98177 505 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FAM160A1Q05DH4 1040 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 PDE4CQ08493 712 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 CAMK2GQ13555 558 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 SNW1Q13573 536 aaKnown RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 CBX2Q14781 532 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 TARBP2Q15633 366 aaKnown RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 NBPF9Q3BBW0 867 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 BBS9Q3SYG4 887 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 ARSHQ5FYA8 562 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 TMEM201Q5SNT2 666 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 CPZQ66K79 652 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 RPTNQ6XPR3 784 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 LIPIQ6XZB0 460 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 USP48Q86UV5 1035 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 JAMLQ86YT9 394 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 AEBP1Q8IUX7 1158 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 ZFPM1Q8IX07 1006 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FNIP1Q8TF40 1166 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 GATAD2BQ8WXI9 593 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 LOXL4Q96JB6 756 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 ZNF512BQ96KM6 892 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FCRL2Q96LA5 508 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FRMD6Q96NE9 622 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 ASB16Q96NS5 453 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 SORCS2Q96PQ0 1159 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 ARID3AQ99856 593 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 SCAND2PQ9GZW5 306 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 AP5S1Q9NUS5 200 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 RNF19AQ9NV58 838 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 IMPACTQ9P2X3 320 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 SRRDQ9UH36 339 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 DBR1Q9UK59 544 aaKnown RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FBXL21Q9UKT6 434 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 FAN1Q9Y2M0 1017 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 GPR55Q9Y2T6 319 aaPredicted RBP1.17□□□□□ -2.22
SNORD28-201ENST00000384706 HCFC2Q9Y5Z7 792 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 AK5Q9Y6K8 562 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 DUSP10Q9Y6W6 482 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 PMF1-BGLAPU3KQ54 211 aa1.17□□□□□ -2.22
SNORD28-201ENST00000384706 IRS2Q9Y4H2 1338 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 F8W031 263 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 RGS13O14921 159 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MATN3O15232 486 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 TLR3O15455 904 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 NOBOXO60393 691 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 UBOX5O94941 541 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PLA2G1BP04054 148 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 P4HBP07237 508 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MSL3P1P0C860 447 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ATF2P15336 505 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 VAV1P15498 845 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms