RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ZCCHC4Q9H5U6 513 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CNNM2Q9H8M5 875 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 GPR55Q9Y2T6 319 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TRIM13O60858 407 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 VIPR1P32241 457 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 RTP1P59025 263 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 RAD51AP2Q09MP3 1159 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KIR3DS1Q14943 382 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 GK5Q6ZS86 529 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PANK1Q8TE04 598 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ZNF296Q8WUU4 475 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CNTD2Q9H8S5 307 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 EHMT1Q9H9B1 1298 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SIRT5Q9NXA8 310 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 UBP1Q9NZI7 540 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 IRAK3Q9Y616 596 aa4.74□□□□□ -1.65
RNU6-1040P-201ENST00000383974 FADS2P1A8MWK0 482 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MEIS1O00470 390 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PDIA4P13667 645 aaKnown RBP4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PNLIPP16233 465 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CCNFP41002 786 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CLCQ05315 142 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 HSF5Q4G112 596 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SEZ6Q53EL9 994 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TMEM151BQ8IW70 566 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MARCH10Q8NA82 808 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MKRN2Q9H000 416 aaKnown RBP4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ANTXR1Q9H6X2 564 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CHST7Q9NS84 486 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ERVK13-1Q9NX77 482 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ADAMTS1Q9UHI8 967 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TAF6LQ9Y6J9 622 aa4.73□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 N4BP3O15049 544 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 NME1P15531 152 aaKnown RBP4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CTSKP43235 329 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CDR1P51861 262 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ERVFRD-1P60508 538 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 YBX1P67809 324 aaKnown RBP4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 APOBRQ0VD83 1088 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 OLFML2BQ68BL8 750 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 HS2ST1Q7LGA3 356 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TMEM192Q8IY95 271 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 RELTQ969Z4 430 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 DACT3Q96B18 629 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SLC6A18Q96N87 628 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CDADC1Q9BWV3 514 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 EPB41L4AQ9HCS5 686 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 GFOD1Q9NXC2 390 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TNFRSF10DQ9UBN6 386 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 GGT7Q9UJ14 662 aa4.72□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MEIS3P2A8K0S8 358 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 IRS4O14654 1257 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ZNF205O95201 554 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ERCC3P19447 782 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 MCM4P33991 863 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 BMP8BP34820 402 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CEBPAP49715 358 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 AFF3P51826 1226 aaKnown RBP4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CCDC27Q2M243 656 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 GALNT18Q6P9A2 607 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CRTC3Q6UUV7 619 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SLCO6A1Q86UG4 719 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 REXO1Q8N1G1 1221 aaKnown RBP4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 PCDHB12Q9Y5F1 795 aa4.71□□□□□ -1.66
RNU6-1040P-201ENST00000383974 WTIPA6NIX2 430 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NUDT19A8MXV4 375 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ABLIM1O14639 778 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TNFRSF10CO14798 259 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 FOXD2O60548 495 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 MPOP05164 745 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 PRKCAP17252 672 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NFIXQ14938 502 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TMC6Q7Z403 805 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TMEFF1Q8IYR6 380 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 MZB1Q8WU39 189 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SLC9A7Q96T83 725 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 XYLT2Q9H1B5 865 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TNFRSF12AQ9NP84 129 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 RTEL1Q9NZ71 1219 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 KLHL14Q9P2G3 628 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 FBXL21Q9UKT6 434 aa4.7□□□□□ -1.66
RNU6-1040P-201ENST00000383974 FAM86C2PA6NEL3 165 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ENDOUP21128 410 aaKnown RBP4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ARL4AP40617 200 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ZNF165P49910 485 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 LAPTM5Q13571 262 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 AUHQ13825 339 aaKnown RBP4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 MRPL58Q14197 206 aaKnown RBP4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CNKSR3Q6P9H4 555 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 IGDCC3Q8IVU1 814 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NUP43Q8NFH3 380 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 BCL2L13Q9BXK5 485 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 IMPACTQ9P2X3 320 aa4.69□□□□□ -1.66
RNU6-1040P-201ENST00000383974 A0A1W2PQ45 241 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 A0A1W2PQY0 241 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 OTOL1A6NHN0 477 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 C9IYK1 514 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms