RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DUSP9Q99956 384 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.32□□□□□ -1.41e-6■■■■□ 21.2
RFC1-202ENST00000381897 NSRP1Q9H0G5 558 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 CCDC113Q9H0I3 377 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 ZFYVE16Q7Z3T8 1539 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 N4BP3O15049 544 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 IL33O95760 270 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 PSMC4P43686 418 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 C4orf50Q6ZRC1 276 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 RAPH1Q70E73 1250 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 UNC5CLQ8IV45 518 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 WDR48Q8TAF3 677 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 RBM46Q8TBY0 533 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 ZBTB9Q96C00 473 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 NUDT16Q96DE0 195 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 IP6K2Q9UHH9 426 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 PCDHA7Q9UN72 937 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 PARP3Q9Y6F1 533 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 FAM169AQ9Y6X4 670 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 WASLO00401 505 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 JAK2O60674 1132 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 MYBP10242 640 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 RNASELQ05823 741 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 NECTIN1Q15223 517 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 TIGD6Q17RP2 521 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 GRIPAP1Q4V328 841 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 TAF4BQ92750 862 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 FUT8Q9BYC5 575 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 GOPCQ9HD26 462 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 HOXB7P09629 217 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 USP17L8P0C7I0 530 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 DRP2Q13474 957 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 DPCR1Q3MIW9 517 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ESCO1Q5FWF5 840 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 G2E3Q7L622 706 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 HS2ST1Q7LGA3 356 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 CPLX4Q7Z7G2 160 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ARHGEF25Q86VW2 580 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 FAM114A1Q8IWE2 563 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 PI4K2BQ8TCG2 481 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 STAG1Q8WVM7 1258 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ZNF274Q96GC6 653 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 IGFLR1Q9H665 355 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 DBF4Q9UBU7 674 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 GMEB2Q9UKD1 530 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 NRXN1Q9ULB1 1477 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 TBCAO75347 108 aaKnown RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 MYCP01106 439 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 TSTA3Q13630 321 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 EIF4A2Q14240 407 aaKnown RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 RBBP5Q15291 538 aaKnown RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 ADCK5Q3MIX3 580 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 DAAM2Q86T65 1068 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 FERMT2Q96AC1 680 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 EFCAB6Q5THR3 1501 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 PFKFB1P16118 471 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ATP1A2P50993 1020 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 GYS2P54840 703 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 DBN1Q16643 649 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 PALM2Q8IXS6 379 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 APPBP2Q92624 585 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ITM2BQ9Y287 266 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 SNX5Q9Y5X3 404 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 GOLGA8CPA6NN73 597 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 HARSP12081 509 aaKnown RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 NUP62P37198 522 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 NDUFA8P51970 172 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 SESN3P58005 492 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 RAPGEF1Q13905 1077 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ANO4Q32M45 955 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 KIF6Q6ZMV9 814 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 N4BP2L2Q92802 583 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 JPH2Q9BR39 696 aaPredicted RBP6.31□□□□□ -1.4
RFC1-202ENST00000381897 ADAM33Q9BZ11 813 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 BRD9Q9H8M2 597 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 FBRSQ9HAH7 460 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 SAR1BQ9Y6B6 198 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 GLI2P10070 1586 aa6.31□□□□□ -1.4
RFC1-202ENST00000381897 ADGRB3O60242 1522 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 TARSL2A2RTX5 802 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 CPP00450 1065 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 SSRP1Q08945 709 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 KIF5AQ12840 1032 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 ALS2CLQ60I27 953 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 KLHL10Q6JEL2 608 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms