RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 SOS2Q07890 1332 aaPredicted RBP13.56□□□□□ -0.24
SHOX-203ENST00000381578 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 CLTAP09496 248 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
SHOX-203ENST00000381578 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 FAM184BQ9ULE4 1060 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 A0A1B0GTH6 734 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 NCK2O43639 380 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 PPP1R7Q15435 360 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
SHOX-203ENST00000381578 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
SHOX-203ENST00000381578 KIF4AO95239 1232 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 MAGEA1P43355 309 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 ASIC1P78348 528 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 ZNF532Q9HCE3 1301 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 KRT2P35908 639 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 ANTXR2P58335 489 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 SCARF1Q14162 830 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 PROCA1Q8NCQ7 364 aaPredicted RBP13.55□□□□□ -0.24
SHOX-203ENST00000381578 TCP11Q8WWU5 503 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 KAT2BQ92831 832 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 ADD3Q9UEY8 706 aaKnown RBP13.55□□□□□ -0.24
SHOX-203ENST00000381578 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 MYBL2P10244 700 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
SHOX-203ENST00000381578 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 RAB21Q9UL25 225 aa13.55□□□□□ -0.24
SHOX-203ENST00000381578 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 SYF2O95926 243 aaKnown RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 PTPREP23469 700 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 PXDNQ92626 1479 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 EIF3HO15372 352 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHOX-203ENST00000381578 SARNPP82979 210 aaKnown RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 PTGDRQ13258 359 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 DMGDHQ9UI17 866 aaKnown RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 DEXIO95424 95 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 MAP3K12Q12852 859 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 SNCBQ16143 134 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 TTC38Q5R3I4 469 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
SHOX-203ENST00000381578 CEP89Q96ST8 783 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 KRT12Q99456 494 aa13.54□□□□□ -0.24
SHOX-203ENST00000381578 CHUKO15111 745 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 CCNI2Q6ZMN8 369 aaPredicted RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 RMND1Q9NWS8 449 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 CLSTN1O94985 981 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 NR1D1P20393 614 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 MAP2K1Q02750 393 aaPredicted RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 TBX2Q13207 712 aaPredicted RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 CUL4BQ13620 913 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 TRIM14Q14142 442 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 PTPAQ15257 358 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
SHOX-203ENST00000381578 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 SLIT3O75094 1523 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 AMOTL1Q8IY63 956 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
SHOX-203ENST00000381578 MMP1P03956 469 aa13.52□□□□□ -0.24
SHOX-203ENST00000381578 USP5P45974 858 aa13.52□□□□□ -0.24
SHOX-203ENST00000381578 RASSF7Q02833 373 aa13.52□□□□□ -0.24
SHOX-203ENST00000381578 NHEJ1Q9H9Q4 299 aaPredicted RBP13.52□□□□□ -0.24
SHOX-203ENST00000381578 HPSEQ9Y251 543 aa13.52□□□□□ -0.24
SHOX-203ENST00000381578 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
SHOX-203ENST00000381578 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
SHOX-203ENST00000381578 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.25
SHOX-203ENST00000381578 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.25
SHOX-203ENST00000381578 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms