RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 WHAMMP3Q1A5X7 153 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 KAT2BQ92831 832 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 NAPBQ9H115 298 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 NID2Q14112 1375 aa15.56■□□□□ 0.08
SDC1-202ENST00000381150 SYF2O95926 243 aaKnown RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 GYPCP04921 128 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 ERVK-24P63145 666 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 COL1A1P02452 1464 aaPredicted RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 CACNA1SQ13698 1873 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 RNF225M0QZC1 329 aaPredicted RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 PLCD1P51178 756 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 STAG1Q8WVM7 1258 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 PANX2Q96RD6 677 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 MYBL2P10244 700 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 NAP1L1P55209 391 aaKnown RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 PPARAQ07869 468 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 CT47A1Q5JQC4 288 aaPredicted RBP15.55■□□□□ 0.08
SDC1-202ENST00000381150 NOSTRINQ8IVI9 506 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 BANK1Q8NDB2 785 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 CAPS2Q9BXY5 557 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 CXorf56Q9H5V9 222 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 SAR1BQ9Y6B6 198 aa15.55■□□□□ 0.08
SDC1-202ENST00000381150 MYO1FO00160 1098 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 ZPR1O75312 459 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 ZNF18P17022 549 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 ERCC3P19447 782 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 RDXP35241 583 aaKnown RBP15.54■□□□□ 0.08
SDC1-202ENST00000381150 USP5P45974 858 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 PDCLQ13371 301 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 OTUD6BQ8N6M0 293 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 HPCAL4Q9UM19 191 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 GNAT2P19087 354 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 HNRNPH1P31943 449 aaKnown RBP15.54■□□□□ 0.08
SDC1-202ENST00000381150 CXCR5P32302 372 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 PTF1AQ7RTS3 328 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 TRIM22Q8IYM9 498 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 SELENOOQ9BVL4 669 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 YY1AP1Q9H869 796 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 SLC4A4Q9Y6R1 1079 aa15.54■□□□□ 0.08
SDC1-202ENST00000381150 FAM205CA6NFA0 338 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 KCNQ4P56696 695 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 SLC10A5Q5PT55 438 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CCDC70Q6NSX1 233 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CEP57Q86XR8 500 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 MAP3K14Q99558 947 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
SDC1-202ENST00000381150 A0A1B0GTH6 734 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 IDEP14735 1019 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 IRAK1P51617 712 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CYP27A1Q02318 531 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 KCTD19Q17RG1 926 aaPredicted RBP15.53■□□□□ 0.08
SDC1-202ENST00000381150 SPATA1Q5VX52 437 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 SH2D3CQ8N5H7 860 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 GIMAP7Q8NHV1 300 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CTCFLQ8NI51 663 aaPredicted RBP15.53■□□□□ 0.08
SDC1-202ENST00000381150 OXER1Q8TDS5 423 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CNNM2Q9H8M5 875 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 FRMD3A2A2Y4 597 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 GYG1P46976 350 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 CYP26C1Q6V0L0 522 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 MFSD6Q6ZSS7 791 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 SMIM5Q71RC9 77 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 TMTC1Q8IUR5 882 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 MIGA1Q8NAN2 632 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 JAKMIP2Q96AA8 810 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 PLIN2Q99541 437 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 SMARCAL1Q9NZC9 954 aa15.53■□□□□ 0.08
SDC1-202ENST00000381150 IQSEC3Q9UPP2 1182 aaPredicted RBP15.53■□□□□ 0.08
SDC1-202ENST00000381150 EPN1Q9Y6I3 576 aaPredicted RBP15.53■□□□□ 0.08
SDC1-202ENST00000381150 UBE4AQ14139 1066 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 MORC3Q14149 939 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 ZNF174Q15697 407 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 ZNF384Q8TF68 577 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
SDC1-202ENST00000381150 KRT23Q9C075 422 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 ABHD10Q9NUJ1 306 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 MINPP1Q9UNW1 487 aa15.52■□□□□ 0.08
SDC1-202ENST00000381150 SCN7AQ01118 1682 aa15.52■□□□□ 0.07
SDC1-202ENST00000381150 GBP6Q6ZN66 633 aa15.52■□□□□ 0.07
SDC1-202ENST00000381150 COG1Q8WTW3 980 aa15.52■□□□□ 0.07
SDC1-202ENST00000381150 LRP2BPQ9P2M1 347 aa15.52■□□□□ 0.07
SDC1-202ENST00000381150 SMIM22K7EJ46 135 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 RGL2O15211 777 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 RNASE9P60153 205 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 RIOK1Q9BRS2 568 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 NAA15Q9BXJ9 866 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 STK36Q9NRP7 1315 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 PRDM1O75626 825 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 USP14P54578 494 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 KRT31Q15323 416 aa15.51■□□□□ 0.07
SDC1-202ENST00000381150 FAM98CQ17RN3 349 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 NOC3LQ8WTT2 800 aaKnown RBP15.51■□□□□ 0.07
SDC1-202ENST00000381150 MTA3Q9BTC8 594 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms