RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 ZNF792Q3KQV3 632 aa20.51■□□□□ 0.87
HMGN1-204ENST00000380749 LRIT3Q3SXY7 679 aa20.51■□□□□ 0.87
HMGN1-204ENST00000380749 FAM47AQ5JRC9 791 aa20.51■□□□□ 0.87
HMGN1-204ENST00000380749 GPR153Q6NV75 609 aa20.51■□□□□ 0.87
HMGN1-204ENST00000380749 LRRC47Q8N1G4 583 aaKnown RBP20.51■□□□□ 0.87
HMGN1-204ENST00000380749 A0A0C4DFX4 3053 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 ZBED4O75132 1171 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 RARBP10826 455 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 PPARAQ07869 468 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 GMCL1P1Q8NEA9 526 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 MKL1Q969V6 931 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 KIFC2Q96AC6 838 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 FEM1BQ9UK73 627 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 CNPY2Q9Y2B0 182 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 ATP11BQ9Y2G3 1177 aa20.5■□□□□ 0.87
HMGN1-204ENST00000380749 LRRC41Q15345 812 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 NEDD1Q8NHV4 660 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 DDX11Q96FC9 970 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 XPNPEP3Q9NQH7 507 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 ISY1Q9ULR0 285 aaKnown RBP20.49■□□□□ 0.87
HMGN1-204ENST00000380749 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
HMGN1-204ENST00000380749 ATP2A1O14983 1001 aa20.48■□□□□ 0.87
HMGN1-204ENST00000380749 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
HMGN1-204ENST00000380749 CPXCR1Q8N123 301 aa20.48■□□□□ 0.87
HMGN1-204ENST00000380749 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
HMGN1-204ENST00000380749 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
HMGN1-204ENST00000380749 AKR1A1P14550 325 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 SLC4A3P48751 1232 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 SLC39A5Q6ZMH5 540 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 RNF180Q86T96 592 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 SLC38A10Q9HBR0 1119 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 FBXO40Q9UH90 709 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 LAMA4Q16363 1823 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 SYNGAP1Q96PV0 1343 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 LRRC37A2A6NM11 1700 aa20.47■□□□□ 0.87
HMGN1-204ENST00000380749 BMP3P12645 472 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 ADCYAP1R1P41586 468 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 OAZ1P54368 228 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 TFAP4Q01664 338 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 SLFN13Q68D06 897 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 RIPK3Q9Y572 518 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 FDX1P10109 184 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 STAT2P52630 851 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 SNX17Q15036 470 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 TRIM60Q495X7 471 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
HMGN1-204ENST00000380749 RAVER2Q9HCJ3 691 aaKnown RBP20.46■□□□□ 0.87
HMGN1-204ENST00000380749 PRDM5Q9NQX1 630 aaPredicted RBP20.46■□□□□ 0.87
HMGN1-204ENST00000380749 TSPY2A6NKD2 308 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 ZNF865P0CJ78 1059 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 TAL1P17542 331 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 IKQ13123 557 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 ZNF467Q7Z7K2 595 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-204ENST00000380749 ANKRD35Q8N283 1001 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 CHST13Q8NET6 341 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 STX8Q9UNK0 236 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 PHF24Q9UPV7 400 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 LCTP09848 1927 aa20.45■□□□□ 0.86
HMGN1-204ENST00000380749 MYH6P13533 1939 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 DNAJC25-GNG10A0A024R161 153 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 SLC1A4P43007 532 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 C1orf53Q5VUE5 145 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 DEFB123Q8N688 67 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 CHURC1Q8WUH1 139 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 ZHX1Q9UKY1 873 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-204ENST00000380749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
HMGN1-204ENST00000380749 CDH23Q9H251 3354 aa20.44■□□□□ 0.86
HMGN1-204ENST00000380749 TMEM232C9JQI7 657 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 PGK1P00558 417 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 PDE1AP54750 535 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 MAMDC4Q6UXC1 1216 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 PDLIM7Q9NR12 457 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 HELLSQ9NRZ9 838 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 UNC80Q8N2C7 3258 aa20.43■□□□□ 0.86
HMGN1-204ENST00000380749 FOXP2O15409 715 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 CTDSPL2Q05D32 466 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 LENG1Q96BZ8 264 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-204ENST00000380749 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 FAM184BQ9ULE4 1060 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 SYNRGQ9UMZ2 1314 aa20.42■□□□□ 0.86
HMGN1-204ENST00000380749 MYO9BQ13459 2157 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 A0A1W2PQ45 241 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-204ENST00000380749 A0A1W2PQY0 241 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
HMGN1-204ENST00000380749 AAMPQ13685 434 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 TICAM2Q86XR7 235 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 ANAPC4Q9UJX5 808 aa20.41■□□□□ 0.86
HMGN1-204ENST00000380749 ORC4O43929 436 aa20.4■□□□□ 0.86
HMGN1-204ENST00000380749 ADAMTS4O75173 837 aa20.4■□□□□ 0.86
HMGN1-204ENST00000380749 SNAI1O95863 264 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-204ENST00000380749 MCCP23508 829 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms