RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ZNF713Q8N859 430 aaPredicted RBP14.32□□□□□ -0.12
VPS16-202ENST00000380445 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 VGLL3A8MV65 326 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 KCNJ6P48051 423 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 NFE2L3Q9Y4A8 694 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 MYO3BQ8WXR4 1341 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 MMP10P09238 476 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 DPYDQ12882 1025 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 PICALMQ13492 652 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 DTHD1Q6ZMT9 781 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 KRT25Q7Z3Z0 450 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 C16orf45Q96MC5 204 aaPredicted RBP14.31□□□□□ -0.12
VPS16-202ENST00000380445 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 GOLGA8HP0CJ92 632 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 TNNT1P13805 278 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 NAPAP54920 295 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 GABPAQ06546 454 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 TYW1BQ6NUM6 668 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 C4orf32Q8N8J7 132 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 CCDC112Q8NEF3 446 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
VPS16-202ENST00000380445 QSER1Q2KHR3 1735 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
VPS16-202ENST00000380445 MTMR4Q9NYA4 1195 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 ZNF18P17022 549 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 PRPHP41219 470 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 E2F4Q16254 413 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 ASPRV1Q53RT3 343 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 VSTM4Q8IW00 320 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 RMND1Q9NWS8 449 aa14.3□□□□□ -0.12
VPS16-202ENST00000380445 KIF2AO00139 706 aaPredicted RBP14.29□□□□□ -0.12
VPS16-202ENST00000380445 DOK7Q18PE1 504 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 ARMCX5Q6P1M9 558 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 CERS5Q8N5B7 392 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 SMCO2A6NFE2 343 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
VPS16-202ENST00000380445 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPS16-202ENST00000380445 PTPN14Q15678 1187 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 MRIQ9BWK5 157 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
VPS16-202ENST00000380445 ESYT2A0FGR8 921 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 CCP110O43303 1012 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 CBX1P83916 185 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
VPS16-202ENST00000380445 NONOQ15233 471 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS16-202ENST00000380445 IL17AQ16552 155 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 INF2Q27J81 1249 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 SPATA1Q5VX52 437 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 CCAR2Q8N163 923 aaKnown RBP14.28□□□□□ -0.12
VPS16-202ENST00000380445 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS16-202ENST00000380445 ADAMTS3O15072 1205 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 TTLL1O95922 423 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 PDHBP11177 359 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 FKBP1AP62942 108 aaKnown RBP14.28□□□□□ -0.12
VPS16-202ENST00000380445 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 DPF2Q92785 391 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 C10orf71Q711Q0 1435 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
VPS16-202ENST00000380445 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
VPS16-202ENST00000380445 MYL1P05976 194 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 STAT6P42226 847 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 SEMA3FQ13275 785 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 AK8Q96MA6 479 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 CTAGE1Q96RT6 745 aa14.28□□□□□ -0.12
VPS16-202ENST00000380445 SYNRGQ9UMZ2 1314 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 USP17L5A8MUK1 530 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 H0YIN7 160 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 TUBB4AP04350 444 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 UBA7P41226 1012 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 CEP135Q66GS9 1140 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 STYK1Q6J9G0 422 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 CDC42EP5Q6NZY7 148 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 DDX4Q9NQI0 724 aaKnown RBP14.27□□□□□ -0.12
VPS16-202ENST00000380445 DISC1Q9NRI5 854 aa14.27□□□□□ -0.12
VPS16-202ENST00000380445 EP400Q96L91 3159 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 SCNN1DP51172 638 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.13
VPS16-202ENST00000380445 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 CCDC17Q96LX7 622 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 PIGSQ96S52 555 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
VPS16-202ENST00000380445 AKR1B1P15121 316 aa14.26□□□□□ -0.13
VPS16-202ENST00000380445 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms