RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 TPM4P67936 248 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 IL17AQ16552 155 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 CCDC12Q8WUD4 166 aaPredicted RBP13.67□□□□□ -0.22
USP3-202ENST00000380324 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 SMCO2A6NFE2 343 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 BAG6P46379 1132 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 FKBP1AP62942 108 aaKnown RBP13.66□□□□□ -0.22
USP3-202ENST00000380324 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 ASPRV1Q53RT3 343 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
USP3-202ENST00000380324 FILIP1Q7Z7B0 1213 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 TRIM34Q9BYJ4 488 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 ZMYND12Q9H0C1 365 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
USP3-202ENST00000380324 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
USP3-202ENST00000380324 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 CDC25AP30304 524 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 MYL5Q02045 173 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 GALNT17Q6IS24 598 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 KANK3Q6NY19 840 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 STAMQ92783 540 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 EHD4Q9H223 541 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 IFNKQ9P0W0 207 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 OFD1O75665 1012 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
USP3-202ENST00000380324 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 XPO4Q9C0E2 1151 aaKnown RBP13.65□□□□□ -0.22
USP3-202ENST00000380324 C6orf50Q9HD87 102 aa13.65□□□□□ -0.22
USP3-202ENST00000380324 IKBKBO14920 756 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 SLC16A2P36021 539 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 HDLBPQ00341 1268 aaKnown RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 CFAP100Q494V2 611 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 COA7Q96BR5 231 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 IDI2Q9BXS1 227 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 HSD3B7Q9H2F3 369 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 RAD17O75943 681 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 GDF11O95390 407 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 GNA11P29992 359 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 CC2D2BQ6DHV5 1058 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 TRMT44Q8IYL2 757 aaKnown RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 PAGE5Q96GU1 130 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 ZNF277Q9NRM2 450 aaPredicted RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 PI4KBQ9UBF8 816 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 BIN2Q9UBW5 565 aaPredicted RBP13.64□□□□□ -0.23
USP3-202ENST00000380324 COL4A5P29400 1685 aa13.64□□□□□ -0.23
USP3-202ENST00000380324 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 DPEP1P16444 411 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP3-202ENST00000380324 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 ARL6IP4Q66PJ3 421 aaKnown RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 KRT25Q7Z3Z0 450 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 CACTINQ8WUQ7 758 aaKnown RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 ARFGEF1Q9Y6D6 1849 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 TXLNAP40222 546 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 MORC3Q14149 939 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP3-202ENST00000380324 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
USP3-202ENST00000380324 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
USP3-202ENST00000380324 EEF2P13639 858 aaKnown RBP13.62□□□□□ -0.23
USP3-202ENST00000380324 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP3-202ENST00000380324 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
USP3-202ENST00000380324 E2F4Q16254 413 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 DTHD1Q6ZMT9 781 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 IQUBQ8NA54 791 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 FANCLQ9NW38 375 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms