RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 PDE2AO00408 941 aaPredicted RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 TRIM21P19474 475 aaKnown RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 PBX1P40424 430 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 GUCY2FP51841 1108 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 SLC8A3P57103 927 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 PPARAQ07869 468 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 SSRP1Q08945 709 aaKnown RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 RILPL1Q5EBL4 403 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 UBE3BQ7Z3V4 1068 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 TSEN2Q8NCE0 465 aaKnown RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 WASF1Q92558 559 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 NUCKS1Q9H1E3 243 aaKnown RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 BATF3Q9NR55 127 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 MAGEC2Q9UBF1 373 aaPredicted RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 MAST3O60307 1309 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 ENO4A6NNW6 628 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 KCNJ18B7U540 433 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 ZBTB43O43298 467 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 CAND2O75155 1236 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 PTPREP23469 700 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 CASP1P29466 404 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 PDE6BP35913 854 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 GRIN1Q05586 938 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 MYO1EQ12965 1108 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 KCNJ12Q14500 433 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 TRIM22Q8IYM9 498 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 SPATA4Q8NEY3 305 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 CYFIP2Q96F07 1278 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 ALS2CR12Q96Q35 445 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 XRN1Q8IZH2 1706 aaKnown RBP8.11□□□□□ -1.11
TRIM6-202ENST00000380097 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 PAK2Q13177 524 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 RCSD1Q6JBY9 416 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 DIS3L2Q8IYB7 885 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 MMGT1Q8N4V1 131 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 TRIM58Q8NG06 486 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 STAMQ92783 540 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 ZNF496Q96IT1 587 aaPredicted RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 COPRSQ9NQ92 184 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 TTC26A0AVF1 554 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 GMNCA6NCL1 334 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CXCR5P32302 372 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 TIMM10P62072 90 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 HLTFQ14527 1009 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 AKAP4Q5JQC9 854 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CDKAL1Q5VV42 579 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CAPRIN2Q6IMN6 1127 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 HOOK2Q96ED9 719 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 HMGB1P1B2RPK0 211 aaPredicted RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 FGAP02671 866 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 CLTAP09496 248 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 DNA2P51530 1060 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 PAK1Q13153 545 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 GKAP1Q5VSY0 366 aaPredicted RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 APTXQ7Z2E3 356 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 ZCRB1Q8TBF4 217 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 ZNF483Q8TF39 744 aaPredicted RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 NSMCE1Q8WV22 266 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 TCP11Q8WWU5 503 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 RUBCNQ92622 972 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 ATP6V1G3Q96LB4 118 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 GSDMAQ96QA5 445 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 SPAG5Q96R06 1193 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 TSGA10Q9BZW7 698 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 NFU1Q9UMS0 254 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
TRIM6-202ENST00000380097 REXO2Q9Y3B8 237 aaKnown RBP8.1□□□□□ -1.11
TRIM6-202ENST00000380097 KLHL33A6NCF5 533 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 GCOM1H8Y6P7 765 aaPredicted RBP8.09□□□□□ -1.11
TRIM6-202ENST00000380097 CYP27B1O15528 508 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 MYZAPP0CAP1 466 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 TCP1P17987 556 aaKnown RBP8.09□□□□□ -1.11
TRIM6-202ENST00000380097 RBM5P52756 815 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRIM6-202ENST00000380097 RWDD2BP57060 319 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 EPHA10Q5JZY3 1008 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 MAGEC3Q8TD91 643 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 ZBTB10Q96DT7 871 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 EPB41L5Q9HCM4 733 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 GGA2Q9UJY4 613 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 FBXO2Q9UK22 296 aaPredicted RBP8.09□□□□□ -1.11
TRIM6-202ENST00000380097 SNX12Q9UMY4 172 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 KCNJ14Q9UNX9 436 aa8.09□□□□□ -1.11
TRIM6-202ENST00000380097 ACTN4O43707 911 aaKnown RBP8.09□□□□□ -1.11
TRIM6-202ENST00000380097 FECHP22830 423 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms