RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CALML3P27482 149 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 STAT6P42226 847 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 ERVK-24P63145 666 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 TCP11X2Q5H9J9 407 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 ACRBPQ8NEB7 543 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 ZSWIM4Q9H7M6 989 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 TRIM49BA6NDI0 452 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 KCNJ18B7U540 433 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 KCNJ12Q14500 433 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 INF2Q27J81 1249 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 TGFBRAP1Q8WUH2 860 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 ITIH6Q6UXX5 1313 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 CCDC88AQ3V6T2 1871 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
RFC3-201ENST00000380071 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 PMS1P54277 932 aaKnown RBP13.72□□□□□ -0.21
RFC3-201ENST00000380071 GRM4Q14833 912 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 CPVLQ9H3G5 476 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 MYH8P13535 1937 aa13.72□□□□□ -0.21
RFC3-201ENST00000380071 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 TPM1P09493 284 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 GPR161Q8N6U8 529 aaKnown RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 LRRC15Q8TF66 581 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 ABHD10Q9NUJ1 306 aa13.71□□□□□ -0.21
RFC3-201ENST00000380071 SAP30BPQ9UHR5 308 aaKnown RBP13.71□□□□□ -0.21
RFC3-201ENST00000380071 SASH3O75995 380 aa13.71□□□□□ -0.22
RFC3-201ENST00000380071 NFIXQ14938 502 aa13.71□□□□□ -0.22
RFC3-201ENST00000380071 STX8Q9UNK0 236 aa13.71□□□□□ -0.22
RFC3-201ENST00000380071 KIF5CO60282 957 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 FECHP22830 423 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 TXLNAP40222 546 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 FAM182BQ5T319 152 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 MAPKAPK5Q8IW41 473 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 ZNF444Q8N0Y2 327 aaPredicted RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 STXBP3O00186 592 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 PARP1P09874 1014 aaKnown RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 UBXN1Q04323 297 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 RC3H1Q5TC82 1133 aaKnown RBP13.7□□□□□ -0.22
RFC3-201ENST00000380071 ADSSL1Q8N142 457 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 CCDC51Q96ER9 411 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 CHP1Q99653 195 aa13.7□□□□□ -0.22
RFC3-201ENST00000380071 RGL2O15211 777 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 KLRC4O43908 158 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 KRT9P35527 623 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 SPAG1Q07617 926 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 TMTC1Q8IUR5 882 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 SLC35F6Q8N357 371 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
RFC3-201ENST00000380071 H7C1D1 291 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 UBA7P41226 1012 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 GNAQP50148 359 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 EEF2KMTQ96G04 330 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
RFC3-201ENST00000380071 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
RFC3-201ENST00000380071 RASA1P20936 1047 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 ARHGAP25P42331 645 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 ANKRD20A12PQ8NF67 263 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 CDC23Q9UJX2 597 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 BAG3O95817 575 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 CHMP4BP1P59074 171 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 SRGAP1Q7Z6B7 1085 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
RFC3-201ENST00000380071 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms