RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF569Q5MCW4 686 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC148Q8NFR7 591 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CDC5LQ99459 802 aaKnown RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MTRQ99707 1265 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MYD88Q99836 296 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 SLC5A4Q9NY91 659 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 L3MBTL1Q9Y468 752 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MYH3P11055 1940 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 INHBCP55103 352 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 MKRN4PQ13434 485 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 PROSER3Q2NL68 480 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CFAP100Q494V2 611 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CRELD2Q6UXH1 353 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CCT8L2Q96SF2 557 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 POLD4Q9HCU8 107 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 PCMTD2Q9NV79 361 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 A0A087WZG4 1122 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CTAGE9A4FU28 777 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ZFYP08048 801 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 SCTRP47872 440 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 SEC24CP53992 1094 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 TBX2Q13207 712 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 NCAPH2Q6IBW4 605 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 C17orf50Q8WW18 174 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 TRIM7Q9C029 511 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF510Q9Y2H8 683 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 LRP5O75197 1615 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ARAP2Q8WZ64 1704 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 KIF5CO60282 957 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ZMYND10O75800 440 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC175P0C221 793 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 ADKP55263 362 aaKnown RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 DEUP1Q05D60 604 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 PTGISQ16647 500 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 NLRP14Q86W24 1093 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 SLC35F6Q8N357 371 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 KAZALD1Q96I82 304 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDKL5-201ENST00000379989 SENP2Q9HC62 589 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 INTS13Q9NVM9 706 aa8.34□□□□□ -1.07
CDKL5-201ENST00000379989 MAP3K15Q6ZN16 1313 aa8.34□□□□□ -1.08
CDKL5-201ENST00000379989 CBFA2T2O43439 604 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SERPINC1P01008 464 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 MCM3P25205 808 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 GUCY1A3Q02108 690 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SPECC1Q5M775 1068 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 L3MBTL3Q96JM7 780 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 KIAA1468Q9P260 1216 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 NEDD4P46934 1319 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 DOT1LQ8TEK3 1739 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 DPPA5A6NC42 116 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 NT5C2P49902 561 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 CCDC57Q2TAC2 916 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 ARMC9Q7Z3E5 817 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 TEKT4Q8WW24 435 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 FAM167BQ9BTA0 163 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 HELLSQ9NRZ9 838 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 WDR35Q9P2L0 1181 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SPATA31A1Q5TZJ5 1347 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 ZNF189O75820 626 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 FAM107AO95990 144 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 CSF1RP07333 972 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 EPB41P11171 864 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 GNAQP50148 359 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SLC39A6Q13433 755 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 MYBPC2Q14324 1141 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 AACSQ86V21 672 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 SH2D3CQ8N5H7 860 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 PDILTQ8N807 584 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 FSIP1Q8NA03 581 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
CDKL5-201ENST00000379989 AGAP3Q96P47 875 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 CFAP45Q9UL16 551 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 C2CD2Q9Y426 696 aa8.33□□□□□ -1.08
CDKL5-201ENST00000379989 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms