RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
SMS-201ENST00000379404 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
SMS-201ENST00000379404 NEDD4P46934 1319 aa17.38■□□□□ 0.37
SMS-201ENST00000379404 RAD50Q92878 1312 aa17.38■□□□□ 0.37
SMS-201ENST00000379404 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
SMS-201ENST00000379404 TMEM232C9JQI7 657 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
SMS-201ENST00000379404 PTH1RQ03431 593 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 SKAP1Q86WV1 359 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 KIFC2Q96AC6 838 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 TEX13BQ9BXU2 312 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 CTNNA3Q9UI47 895 aa17.37■□□□□ 0.37
SMS-201ENST00000379404 SGSM2O43147 1006 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
SMS-201ENST00000379404 TOP1P11387 765 aaKnown RBP17.36■□□□□ 0.37
SMS-201ENST00000379404 FCER1AP12319 257 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
SMS-201ENST00000379404 SLC1A4P43007 532 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 NT5C2P49902 561 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 OLFML2BQ68BL8 750 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 LHX8Q68G74 356 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMS-201ENST00000379404 DPP9Q86TI2 863 aa17.36■□□□□ 0.37
SMS-201ENST00000379404 ZBED4O75132 1171 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 FDX1P10109 184 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 CYP2C19P33261 490 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 COPB2P35606 906 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 STAT2P52630 851 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 OAZ1P54368 228 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 IMMTQ16891 758 aaKnown RBP17.35■□□□□ 0.37
SMS-201ENST00000379404 KCTD1Q719H9 257 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 FAM160B2Q86V87 743 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 TRPV1Q8NER1 839 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 CHURC1Q8WUH1 139 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 RUFY2Q8WXA3 655 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 ANKS1AQ92625 1134 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 ESR2Q92731 530 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
SMS-201ENST00000379404 OGDHLQ9ULD0 1010 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 ZNF536O15090 1300 aa17.35■□□□□ 0.37
SMS-201ENST00000379404 KDM4AO75164 1064 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 ZNF792Q3KQV3 632 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 MFSD14CQ5VZR4 134 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 SNRNP48Q6IEG0 339 aaKnown RBP17.34■□□□□ 0.37
SMS-201ENST00000379404 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 CPXCR1Q8N123 301 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 MAML3Q96JK9 1138 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 MMP19Q99542 508 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 ZSWIM5Q9P217 1185 aa17.34■□□□□ 0.37
SMS-201ENST00000379404 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.36
SMS-201ENST00000379404 PGK2P07205 417 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 CYBAP13498 195 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
SMS-201ENST00000379404 TTBK2Q6IQ55 1244 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 MAP4K1Q92918 833 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 PRR12Q9ULL5 1215 aa17.33■□□□□ 0.36
SMS-201ENST00000379404 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
SMS-201ENST00000379404 B4E1Z4 1266 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 CYP21A2P08686 494 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 PDHBP11177 359 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 KCTD2Q14681 263 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 ANKLE1Q8NAG6 615 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 SLC5A4Q9NY91 659 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 TAF6LQ9Y6J9 622 aa17.32■□□□□ 0.36
SMS-201ENST00000379404 CHST13Q8NET6 341 aa17.31■□□□□ 0.36
SMS-201ENST00000379404 DIS3LQ8TF46 1054 aaKnown RBP17.31■□□□□ 0.36
SMS-201ENST00000379404 PAWRQ96IZ0 340 aaKnown RBP17.31■□□□□ 0.36
SMS-201ENST00000379404 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
SMS-201ENST00000379404 SNAP25P60880 206 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 CCDC178Q5BJE1 867 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 BMP2KLQ5H9B9 411 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 PRAMEF19Q5SWL8 479 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
SMS-201ENST00000379404 ZSCAN10Q96SZ4 725 aaPredicted RBP17.3■□□□□ 0.36
SMS-201ENST00000379404 KRT23Q9C075 422 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 RANBP17Q9H2T7 1088 aaKnown RBP17.3■□□□□ 0.36
SMS-201ENST00000379404 CNNM2Q9H8M5 875 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 MTMR7Q9Y216 660 aa17.3■□□□□ 0.36
SMS-201ENST00000379404 SLC16A2P36021 539 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 SEC23AQ15436 765 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 CYB5R4Q7L1T6 521 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 FGD4Q96M96 766 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
SMS-201ENST00000379404 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
SMS-201ENST00000379404 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
SMS-201ENST00000379404 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
SMS-201ENST00000379404 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
SMS-201ENST00000379404 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms