RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SAMD1Q6SPF0 538 aaPredicted RBP22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 C7orf61Q8IZ16 206 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 TEX13BQ9BXU2 312 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 FEM1BQ9UK73 627 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 DNAH12Q6ZR08 3092 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 DNM1LO00429 736 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 RAD21O60216 631 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 CNGA1P29973 690 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 FAM47AQ5JRC9 791 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 SLC38A10Q9HBR0 1119 aa22.45■■□□□ 1.18
TMEM88B-201ENST00000378821 KCTD2Q14681 263 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 LRRC26Q2I0M4 334 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 MCMDC2Q4G0Z9 681 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 PPP4R3BQ5MIZ7 849 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 RILPL2Q969X0 211 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 IL17RBQ9NRM6 502 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 RIPK3Q9Y572 518 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
TMEM88B-201ENST00000378821 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 DNAJC25-GNG10A0A024R161 153 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 ORC4O43929 436 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 FDX1P10109 184 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 OAZ1P54368 228 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 SLFN13Q68D06 897 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 MSL3Q8N5Y2 521 aaKnown RBP22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 GMCL1Q96IK5 515 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 FAM227BQ96M60 508 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 TINF2Q9BSI4 451 aa22.43■■□□□ 1.18
TMEM88B-201ENST00000378821 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 PLA2G6O60733 806 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 NEFLP07196 543 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 PGK2P07205 417 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 CTDSPL2Q05D32 466 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 PRAMEF19Q5SWL8 479 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 SNRNP48Q6IEG0 339 aaKnown RBP22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 LRRC47Q8N1G4 583 aaKnown RBP22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 ARRDC4Q8NCT1 418 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 INCENPQ9NQS7 918 aa22.42■■□□□ 1.18
TMEM88B-201ENST00000378821 ZBED4O75132 1171 aa22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 FGAP02671 866 aa22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 BMP3P12645 472 aa22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 MAMDC4Q6UXC1 1216 aa22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 CENPQQ7L2Z9 268 aaPredicted RBP22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 ZMYND8Q9ULU4 1186 aaPredicted RBP22.41■■□□□ 1.18
TMEM88B-201ENST00000378821 HSPD1P10809 573 aaKnown RBP22.4■■□□□ 1.18
TMEM88B-201ENST00000378821 GSPT1P15170 499 aaKnown RBP22.4■■□□□ 1.18
TMEM88B-201ENST00000378821 TTC22Q5TAA0 569 aa22.4■■□□□ 1.18
TMEM88B-201ENST00000378821 ZNF467Q7Z7K2 595 aaPredicted RBP22.4■■□□□ 1.18
TMEM88B-201ENST00000378821 SENP6Q9GZR1 1112 aaPredicted RBP22.4■■□□□ 1.18
TMEM88B-201ENST00000378821 TSPY2A6NKD2 308 aa22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 ZNF865P0CJ78 1059 aaPredicted RBP22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 CHST13Q8NET6 341 aa22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 STAG1Q8WVM7 1258 aa22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 KIFC2Q96AC6 838 aa22.39■■□□□ 1.17
TMEM88B-201ENST00000378821 SYNGAP1Q96PV0 1343 aa22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 MAGEA10P43363 369 aaPredicted RBP22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 STAT2P52630 851 aa22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 ZNF589Q86UQ0 364 aaPredicted RBP22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 FAM160B2Q86V87 743 aa22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 CHURC1Q8WUH1 139 aa22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 RAVER2Q9HCJ3 691 aaKnown RBP22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 LAMA4Q16363 1823 aa22.38■■□□□ 1.17
TMEM88B-201ENST00000378821 SZT2Q5T011 3432 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 TMEM232C9JQI7 657 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 NMT2O60551 498 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 SYN1P17600 705 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 SDSP20132 328 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 SNX17Q15036 470 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 LRRC41Q15345 812 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 GJC2Q5T442 439 aaPredicted RBP22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 RCSD1Q6JBY9 416 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 TCP11L1Q9NUJ3 509 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
TMEM88B-201ENST00000378821 ZNF536O15090 1300 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 CCDC171Q6TFL3 1326 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 PCP11498 1178 aaKnown RBP22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 TAL1P17542 331 aaPredicted RBP22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 MCCP23508 829 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 SLC1A4P43007 532 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 C1orf53Q5VUE5 145 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 SKAP1Q86WV1 359 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 CCDC136Q96JN2 1154 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 FGD4Q96M96 766 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 STX8Q9UNK0 236 aa22.36■■□□□ 1.17
TMEM88B-201ENST00000378821 KBTBD13C9JR72 458 aa22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 RANBP6O60518 1105 aaKnown RBP22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 SNAI1O95863 264 aaPredicted RBP22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 SLC39A5Q6ZMH5 540 aa22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 CTDP1Q9Y5B0 961 aaPredicted RBP22.35■■□□□ 1.17
TMEM88B-201ENST00000378821 RARBP10826 455 aa22.34■■□□□ 1.17
TMEM88B-201ENST00000378821 PHF24Q9UPV7 400 aa22.34■■□□□ 1.17
TMEM88B-201ENST00000378821 AKR1A1P14550 325 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 MFAP1P55081 439 aaKnown RBP22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 TKFCQ3LXA3 575 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms