RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 GALNT17Q6IS24 598 aa19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 RASGRP4Q8TDF6 673 aa19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 ZMYND12Q9H0C1 365 aa19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 CEP131Q9UPN4 1083 aa19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 HPSEQ9Y251 543 aa19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 MORC2Q9Y6X9 1032 aaPredicted RBP19.89■□□□□ 0.77
THUMPD2-201ENST00000378727 MMP14P50281 582 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 CCDC96Q2M329 555 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 KCTD1Q719H9 257 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 JMJD4Q9H9V9 463 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 PCDHA6Q9UN73 950 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 PCDHA8Q9Y5H6 950 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 NAPAP54920 295 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 TYRO3Q06418 890 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 TTC38Q5R3I4 469 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 MICALL2Q8IY33 904 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 ADGRF4Q8IZF3 695 aa19.88■□□□□ 0.77
THUMPD2-201ENST00000378727 ZNF541Q9H0D2 1346 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 CTAGE5O15320 804 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 ZNF202O95125 648 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 SLC16A2P36021 539 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 TRAPPC10P48553 1259 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 DPF2Q92785 391 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 SCAF8Q9UPN6 1271 aaKnown RBP19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 SRPRBQ9Y5M8 271 aaKnown RBP19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 GJA3Q9Y6H8 435 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 TBC1D12O60347 775 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 ZNF174Q15697 407 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 SLFN13Q68D06 897 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 DCAF4Q8WV16 495 aa19.87■□□□□ 0.77
THUMPD2-201ENST00000378727 SPECC1Q5M775 1068 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 MIGA2Q7L4E1 593 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 SAMD7Q7Z3H4 446 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 GMCL1P1Q8NEA9 526 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 CCDC12Q8WUD4 166 aaPredicted RBP19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 MTMR8Q96EF0 704 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 CNOT7Q9UIV1 285 aaKnown RBP19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 UTRNP46939 3433 aa19.86■□□□□ 0.77
THUMPD2-201ENST00000378727 A0A1W2PRG0 241 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 SMCO2A6NFE2 343 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 SLC1A4P43007 532 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 PNMA6FA0A0J9YX94 578 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 USP17L10C9JJH3 530 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 F5H6K3 240 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 hCG_1984214I3L0E3 225 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 RAD21O60216 631 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 PPP1R11O60927 126 aaPredicted RBP19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 SYKP43405 635 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 KLRC3Q07444 240 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 RASA3Q14644 834 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 ZNF713Q8N859 430 aaPredicted RBP19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 ZNF579Q8NAF0 562 aaKnown RBP19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 COA7Q96BR5 231 aa19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 FHDC1Q9C0D6 1143 aaPredicted RBP19.85■□□□□ 0.77
THUMPD2-201ENST00000378727 DICER1Q9UPY3 1922 aaKnown RBP19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 ASTN2O75129 1339 aaPredicted RBP19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 ESYT2A0FGR8 921 aa19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 BMP15O95972 392 aa19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 MAP3K10Q02779 954 aa19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 C6orf50Q9HD87 102 aa19.84■□□□□ 0.77
THUMPD2-201ENST00000378727 CCDC194A0A1B0GVG4 234 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 NDUFB10O96000 172 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 ATP2C1P98194 919 aaPredicted RBP19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 SASS6Q6UVJ0 657 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 ERCC4Q92889 916 aaPredicted RBP19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 TEPSINQ96N21 525 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 SDF4Q9BRK5 362 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 CSRNP2Q9H175 543 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 ZBTB21Q9ULJ3 1066 aa19.83■□□□□ 0.77
THUMPD2-201ENST00000378727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 GNA11P29992 359 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 TNNI2P48788 182 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 PTGDRQ13258 359 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 GMCL1Q96IK5 515 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 TIGD1Q96MW7 591 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 NUP88Q99567 741 aaPredicted RBP19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 KCNH3Q9ULD8 1083 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 SBF1O95248 1867 aa19.83■□□□□ 0.76
THUMPD2-201ENST00000378727 ZBTB5O15062 677 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 MCM7P33993 719 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 ECE1P42892 770 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 INF2Q27J81 1249 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 ARHGAP27Q6ZUM4 889 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 ANO6Q4KMQ2 910 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 USP49Q70CQ1 688 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 ACER1Q8TDN7 264 aa19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.82■□□□□ 0.76
THUMPD2-201ENST00000378727 CAP2P40123 477 aa19.81■□□□□ 0.76
THUMPD2-201ENST00000378727 KIF4BQ2VIQ3 1234 aa19.81■□□□□ 0.76
THUMPD2-201ENST00000378727 UVSSAQ2YD98 709 aa19.81■□□□□ 0.76
THUMPD2-201ENST00000378727 C4orf32Q8N8J7 132 aa19.81■□□□□ 0.76
THUMPD2-201ENST00000378727 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
THUMPD2-201ENST00000378727 TNFAIP1Q13829 316 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 KRT25Q7Z3Z0 450 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 PPP1R9BQ96SB3 815 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 HACL1Q9UJ83 578 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 ATAD5Q96QE3 1844 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms