RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 MFSD6Q6ZSS7 791 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 LRRC47Q8N1G4 583 aaKnown RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 GMCL1Q96IK5 515 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 PFASO15067 1338 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 ZNF213O14771 459 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 TRMT44Q8IYL2 757 aaKnown RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 PRPF38AQ8NAV1 312 aaKnown RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 SLF1Q9BQI6 1058 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 RNF41Q9H4P4 317 aaPredicted RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 C11orf49Q9H6J7 331 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 ZMYND8Q9ULU4 1186 aaPredicted RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 FRMPD3Q5JV73 1810 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 PLXNA1Q9UIW2 1896 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 ATP2A1O14983 1001 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 SGSM2O43147 1006 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 STRNO43815 780 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 PLA2G6O60733 806 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 CYP2C19P33261 490 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 SLFN13Q68D06 897 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 RCSD1Q6JBY9 416 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 RIOX2Q8IUF8 465 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 TRPV1Q8NER1 839 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 MROH8Q9H579 483 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 CTNNA3Q9UI47 895 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 STX8Q9UNK0 236 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 NEDD4P46934 1319 aa20.09■□□□□ 0.81
RER1-202ENST00000378512 CAPN2P17655 700 aa20.08■□□□□ 0.8
RER1-202ENST00000378512 ERCC3P19447 782 aa20.08■□□□□ 0.8
RER1-202ENST00000378512 ABRAQ8N0Z2 381 aa20.08■□□□□ 0.8
RER1-202ENST00000378512 TTC14Q96N46 770 aa20.08■□□□□ 0.8
RER1-202ENST00000378512 FEM1BQ9UK73 627 aa20.08■□□□□ 0.8
RER1-202ENST00000378512 RAD21O60216 631 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 SLC25A27O95847 323 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 BMP3P12645 472 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 SYN1P17600 705 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 ADORA2AP29274 412 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 PLS1Q14651 629 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 IMMTQ16891 758 aaKnown RBP20.07■□□□□ 0.8
RER1-202ENST00000378512 IVNS1ABPQ9Y6Y0 642 aa20.07■□□□□ 0.8
RER1-202ENST00000378512 COBLO75128 1261 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 COL6A1P12109 1028 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 RRP12Q5JTH9 1297 aaKnown RBP20.06■□□□□ 0.8
RER1-202ENST00000378512 MFSD14CQ5VZR4 134 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.06■□□□□ 0.8
RER1-202ENST00000378512 ESR2Q92731 530 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
RER1-202ENST00000378512 FDX1P10109 184 aa20.05■□□□□ 0.8
RER1-202ENST00000378512 TOP1P11387 765 aaKnown RBP20.05■□□□□ 0.8
RER1-202ENST00000378512 STAT3P40763 770 aa20.05■□□□□ 0.8
RER1-202ENST00000378512 PTH1RQ03431 593 aa20.05■□□□□ 0.8
RER1-202ENST00000378512 TMEM47Q9BQJ4 181 aa20.05■□□□□ 0.8
RER1-202ENST00000378512 TOMM22Q9NS69 142 aa20.05■□□□□ 0.8
RER1-202ENST00000378512 LAMA3Q16787 3333 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
RER1-202ENST00000378512 CNGA1P29973 690 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 COPB2P35606 906 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 STAT2P52630 851 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 OAZ1P54368 228 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 DPP9Q86TI2 863 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 SKAP1Q86WV1 359 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 NCAPG2Q86XI2 1143 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
RER1-202ENST00000378512 SNHG28P0DPA3 235 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 MCCP23508 829 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 SLC1A4P43007 532 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 LRRC26Q2I0M4 334 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 FAM160B2Q86V87 743 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 DGKHQ86XP1 1220 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 DCAF4Q8WV16 495 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 MAP4K1Q92918 833 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 TEX13BQ9BXU2 312 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 DNAH12Q6ZR08 3092 aa20.03■□□□□ 0.8
RER1-202ENST00000378512 TMEM232C9JQI7 657 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 CYP21A2P08686 494 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 CYBAP13498 195 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 PRAMEF19Q5SWL8 479 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 BTNL9Q6UXG8 535 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 CHURC1Q8WUH1 139 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 CNNM2Q9H8M5 875 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 ZSWIM5Q9P217 1185 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 DDX20Q9UHI6 824 aaKnown RBP20.02■□□□□ 0.8
RER1-202ENST00000378512 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 SMCHD1A6NHR9 2005 aa20.02■□□□□ 0.8
RER1-202ENST00000378512 B4E1Z4 1266 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 KDM4AO75164 1064 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 OLFML2BQ68BL8 750 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 KIFC2Q96AC6 838 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 GDF15Q99988 308 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 KRT23Q9C075 422 aa20.02■□□□□ 0.79
RER1-202ENST00000378512 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.79
RER1-202ENST00000378512 ZNF536O15090 1300 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 ZBED4O75132 1171 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 FCER1AP12319 257 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 CCDC178Q5BJE1 867 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 SNRNP48Q6IEG0 339 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms