RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.41
RPGR-203ENST00000378505 HARSP12081 509 aaKnown RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 TTC31Q49AM3 519 aaPredicted RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 RASSF4Q9H2L5 321 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 GAS7O60861 476 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 CLEC17AQ6ZS10 378 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 TRIM31Q9BZY9 425 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 STRN3Q13033 797 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 LSM14BQ9BX40 385 aaKnown RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 HYOU1Q9Y4L1 999 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
RPGR-203ENST00000378505 CYP27B1O15528 508 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 PRKAB2O43741 272 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 NR5A1Q13285 461 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 USP21Q9UK80 565 aa12.49□□□□□ -0.41
RPGR-203ENST00000378505 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 GLI2P10070 1586 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 TOB2Q14106 344 aaPredicted RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 AK8Q96MA6 479 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 SLC39A2Q9NP94 309 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 FRMPD2Q68DX3 1309 aaPredicted RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 A0A087WWV3 80 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 ZBED4O75132 1171 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 VIMP08670 466 aaKnown RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 EEF1GP26641 437 aaKnown RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 CASP14P31944 242 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 PRR16Q569H4 304 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 CDC23Q9UJX2 597 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
RPGR-203ENST00000378505 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
RPGR-203ENST00000378505 PDE6BP35913 854 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 MXRA7P84157 204 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 PIGBQ92521 554 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 DHTKD1Q96HY7 919 aaPredicted RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 CCDC17Q96LX7 622 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 PANK4Q9NVE7 773 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 COMMD10Q9Y6G5 202 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 XDHP47989 1333 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 PIH1D3Q9NQM4 214 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 GPATCH4Q5T3I0 446 aaKnown RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 SMC6Q96SB8 1091 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
RPGR-203ENST00000378505 TXNDC16Q9P2K2 825 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 ASIC3Q9UHC3 531 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 AMFRQ9UKV5 643 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
RPGR-203ENST00000378505 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 FOSP01100 380 aaPredicted RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 FERP16591 822 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 TRPC3Q13507 836 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 RASGRF1Q13972 1273 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 FBXO11Q86XK2 927 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 CEP57Q86XR8 500 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 CCDC63Q8NA47 563 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 HOOK2Q96ED9 719 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 MAK16Q9BXY0 300 aaKnown RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 MAN1B1Q9UKM7 699 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 CHD1O14646 1710 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 MYL1P05976 194 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 GPATCH11Q8N954 259 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms