RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ADGRF4Q8IZF3 695 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 WASF1Q92558 559 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
CCDC107-204ENST00000378409 AIFM3Q96NN9 605 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 RIOX1Q9H6W3 641 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
CCDC107-204ENST00000378409 FEM1BQ9UK73 627 aa18.27■□□□□ 0.52
CCDC107-204ENST00000378409 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
CCDC107-204ENST00000378409 PDCP20941 246 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 DDIT3P35638 169 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
CCDC107-204ENST00000378409 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
CCDC107-204ENST00000378409 BTNL9Q6UXG8 535 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
CCDC107-204ENST00000378409 FAM160B2Q86V87 743 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 PIGSQ96S52 555 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 JMJD4Q9H9V9 463 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
CCDC107-204ENST00000378409 SEC63Q9UGP8 760 aaKnown RBP18.26■□□□□ 0.51
CCDC107-204ENST00000378409 SYT1P21579 422 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
CCDC107-204ENST00000378409 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 PKN1Q16512 942 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 SAPCD2Q86UD0 394 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 KIFC2Q96AC6 838 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 PRR12Q9ULL5 1215 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 SMCHD1A6NHR9 2005 aa18.25■□□□□ 0.51
CCDC107-204ENST00000378409 TMEM88BA6NKF7 163 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 PLA2G6O60733 806 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 FLOT1O75955 427 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 SCG2P13521 617 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 ZNF157P51786 506 aaPredicted RBP18.24■□□□□ 0.51
CCDC107-204ENST00000378409 PFKFB3Q16875 520 aaPredicted RBP18.24■□□□□ 0.51
CCDC107-204ENST00000378409 PROCA1Q8NCQ7 364 aaPredicted RBP18.24■□□□□ 0.51
CCDC107-204ENST00000378409 C8orf76Q96K31 380 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 CIZ1Q9ULV3 898 aaPredicted RBP18.24■□□□□ 0.51
CCDC107-204ENST00000378409 ABT1Q9ULW3 272 aaKnown RBP18.24■□□□□ 0.51
CCDC107-204ENST00000378409 TLL2Q9Y6L7 1015 aa18.24■□□□□ 0.51
CCDC107-204ENST00000378409 MYH15Q9Y2K3 1946 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L15C9J2P7 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L13C9JLJ4 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L11C9JVI0 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L18D6R9N7 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L22D6RA61 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L17D6RBQ6 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L19D6RCP7 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L20D6RJB6 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 H3BQV1 296 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 STX6O43752 255 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
CCDC107-204ENST00000378409 SNAP25P60880 206 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 USP17L24Q0WX57 530 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 CDC37Q16543 378 aaPredicted RBP18.23■□□□□ 0.51
CCDC107-204ENST00000378409 TREML2Q5T2D2 321 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 RGMBQ6NW40 437 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 HEATR3Q7Z4Q2 680 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
CCDC107-204ENST00000378409 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
CCDC107-204ENST00000378409 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 ZBTB5O15062 677 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 GTF2A2P52657 109 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 PKP1Q13835 747 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 TRIM29Q14134 588 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 QRICH1Q2TAL8 776 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
CCDC107-204ENST00000378409 RASAL3Q86YV0 1011 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
CCDC107-204ENST00000378409 MTMR8Q96EF0 704 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 GJB4Q9NTQ9 266 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 VPS54Q9P1Q0 977 aa18.22■□□□□ 0.51
CCDC107-204ENST00000378409 CETPP11597 493 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 XBP1P17861 261 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 NUCB2P80303 420 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
CCDC107-204ENST00000378409 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 CATSPERGQ6ZRH7 1159 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
CCDC107-204ENST00000378409 PPP1R9AQ9ULJ8 1098 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 AGTPBP1Q9UPW5 1226 aa18.21■□□□□ 0.51
CCDC107-204ENST00000378409 A0A0G2JMZ2 1700 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 CCL15-CCL14A0A0B4J2E2 113 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
CCDC107-204ENST00000378409 APLP1P51693 650 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 MOGSQ13724 837 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 COG2Q14746 738 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 CCL15Q16663 113 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 KRT40Q6A162 431 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 FBXO18Q8NFZ0 1043 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 MS4A4AQ96JQ5 239 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 RANBP17Q9H2T7 1088 aaKnown RBP18.2■□□□□ 0.5
CCDC107-204ENST00000378409 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
CCDC107-204ENST00000378409 WDR33Q9C0J8 1336 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms