RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 COA1Q9GZY4 146 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 MMP10P09238 476 aa21.83■■□□□ 1.09
PCDHA4-201ENST00000378125 ZNF18P17022 549 aa21.83■■□□□ 1.09
PCDHA4-201ENST00000378125 CCDC148Q8NFR7 591 aa21.83■■□□□ 1.09
PCDHA4-201ENST00000378125 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.08
PCDHA4-201ENST00000378125 AKR1B1P15121 316 aa21.83■■□□□ 1.08
PCDHA4-201ENST00000378125 RASSF8Q8NHQ8 419 aa21.83■■□□□ 1.08
PCDHA4-201ENST00000378125 ZNF622Q969S3 477 aaKnown RBP eCLIP21.83■■□□□ 1.08
PCDHA4-201ENST00000378125 USP40Q9NVE5 1235 aa21.83■■□□□ 1.08
PCDHA4-201ENST00000378125 PDXDC2PQ6P474 469 aa21.82■■□□□ 1.08
PCDHA4-201ENST00000378125 NYAP1Q6ZVC0 841 aa21.82■■□□□ 1.08
PCDHA4-201ENST00000378125 ZNF710Q8N1W2 664 aa21.82■■□□□ 1.08
PCDHA4-201ENST00000378125 NLGN1Q8N2Q7 840 aa21.82■■□□□ 1.08
PCDHA4-201ENST00000378125 DBNDD1Q9H9R9 158 aa21.82■■□□□ 1.08
PCDHA4-201ENST00000378125 SMCO2A6NFE2 343 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 SYNRGQ9UMZ2 1314 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 DTHD1Q6ZMT9 781 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 RRP36Q96EU6 259 aaKnown RBP21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 GSDMAQ96QA5 445 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 CTNND2Q9UQB3 1225 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 MAPK8IP1Q9UQF2 711 aa21.81■■□□□ 1.08
PCDHA4-201ENST00000378125 PPP1R3GB7ZBB8 358 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 NPR1P16066 1061 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 LETM2Q2VYF4 491 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 PPP1R13BQ96KQ4 1090 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 SEC63Q9UGP8 760 aaKnown RBP21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 PCDHAC2Q9Y5I4 1007 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 LTBP1Q14766 1721 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 ERCC5P28715 1186 aaPredicted RBP21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 STAT6P42226 847 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 NT5C2P49902 561 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 ADKP55263 362 aaKnown RBP21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 LZTS2Q9BRK4 669 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 SPZ1Q9BXG8 430 aa21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 BIN2Q9UBW5 565 aaPredicted RBP21.8■■□□□ 1.08
PCDHA4-201ENST00000378125 LONP1P36776 959 aaKnown RBP21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 CACNB3P54284 484 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 ATP2B2Q01814 1243 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 RRAGBQ5VZM2 374 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 ARL6IP4Q66PJ3 421 aaKnown RBP21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 TMC4Q7Z404 712 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 CREBRFQ8IUR6 639 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 CCDC112Q8NEF3 446 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 GPCPD1Q9NPB8 672 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 TEX33O43247 280 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 NRDCO43847 1150 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 CCNT1O60563 726 aaKnown RBP21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 NAA30Q147X3 362 aaPredicted RBP21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 JAKMIP3Q5VZ66 844 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 TMEM260Q9NX78 707 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 MTMR4Q9NYA4 1195 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 PARP3Q9Y6F1 533 aa21.79■■□□□ 1.08
PCDHA4-201ENST00000378125 ADAMTSL1Q8N6G6 1762 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 LRRC37AA6NMS7 1700 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 MYO1BO43795 1136 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 PDHBP11177 359 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 TXLNAP40222 546 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 DAGLBQ8NCG7 672 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 COA7Q96BR5 231 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 ZMYND12Q9H0C1 365 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 PAXBP1Q9Y5B6 917 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 MPHOSPH10O00566 681 aaKnown RBP21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 NFIAQ12857 509 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 SPATA1Q5VX52 437 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 CDC42EP5Q6NZY7 148 aa21.78■■□□□ 1.08
PCDHA4-201ENST00000378125 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
PCDHA4-201ENST00000378125 SOGA3Q5TF21 947 aa21.77■■□□□ 1.08
PCDHA4-201ENST00000378125 ZFPM1Q8IX07 1006 aa21.77■■□□□ 1.08
PCDHA4-201ENST00000378125 GDAQ9Y2T3 454 aa21.77■■□□□ 1.08
PCDHA4-201ENST00000378125 GABPAQ06546 454 aa21.77■■□□□ 1.07
PCDHA4-201ENST00000378125 SPECC1LQ69YQ0 1117 aa21.77■■□□□ 1.07
PCDHA4-201ENST00000378125 TMX4Q9H1E5 349 aaPredicted RBP21.77■■□□□ 1.07
PCDHA4-201ENST00000378125 C6orf50Q9HD87 102 aa21.77■■□□□ 1.07
PCDHA4-201ENST00000378125 DISC1Q9NRI5 854 aa21.77■■□□□ 1.07
PCDHA4-201ENST00000378125 FAM196BA6NMK8 535 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 GTPBP6O43824 516 aaPredicted RBP21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 RAD21O60216 631 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 PDE6BP35913 854 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 UBA7P41226 1012 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 TCP10Q12799 353 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 GALNT17Q6IS24 598 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 KIAA0825Q8IV33 1275 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 PDCL3Q9H2J4 239 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 SERPINB13Q9UIV8 391 aa21.76■■□□□ 1.07
PCDHA4-201ENST00000378125 RPN1P04843 607 aaKnown RBP21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 PRKCSHP14314 528 aaPredicted RBP21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 NR1I3Q14994 352 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 NONOQ15233 471 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 NAALADL2Q58DX5 795 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 CPLX3Q8WVH0 158 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 SYT10Q6XYQ8 523 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 TBCKQ8TEA7 893 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 MASTLQ96GX5 879 aa21.75■■□□□ 1.07
PCDHA4-201ENST00000378125 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 TBX2Q13207 712 aaPredicted RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 LRRC15Q8TF66 581 aa21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 CCDC12Q8WUD4 166 aaPredicted RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 TEKT1Q969V4 418 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms